dbiblast problem

[David.Bauer at SCHERING.DE]

Dear John,

thanks for the info.
Unfortunately the databases I try to index are formated with formatdb 2.2.1
(NCBI).
The blast databases have been updated yesterday, so I rebuild the index.
But the error is highly reproducible. I get the same wrong sequences back when
using the ACC.

David.


I have experienced a similar problem, tring to index WU-BLAST-formatted
databases with
dbiblast. However I got it to work properly with NCBI-BLAST-formatted databases.