No subject

[Qingjuan Gu]

Hi, 
 I am configuring emboss for blast database. I copied part of database from balst formatted database into my test directory. Here is the files:
 
 # ls -l
total 1308
-rwxr--r--   1 root     system     11306 Jul  8 13:52 alu.n.nhr
-rwxr--r--   1 root     system      3988 Jul  8 13:52 alu.n.nin
-rwxr--r--   1 root     system     16640 Jul  8 13:52 alu.n.nsd
-rwxr--r--   1 root     system       411 Jul  8 13:52 alu.n.nsi
-rwxr--r--   1 root     system     20336 Jul  8 13:52 alu.n.nsq
-rwxr--r--   1 nobody   blast      41492 Feb 27 22:15 ecoli.nt.nhr
-rwxr--r--   1 nobody   blast       4864 Feb 27 22:15 ecoli.nt.nin
-rwxr--r--   1 nobody   blast       3200 Feb 27 22:15 ecoli.nt.nnd
-rwxr--r--   1 nobody   blast         60 Feb 27 22:15 ecoli.nt.nni
-rwxr--r--   1 nobody   blast      58320 Feb 27 22:15 ecoli.nt.nsd
-rwxr--r--   1 nobody   blast       1264 Feb 27 22:15 ecoli.nt.nsi
-rwxr--r--   1 nobody   blast    1165813 Feb 27 22:15 ecoli.nt.nsq

When I run dbiblast command, there are some errors:
# dbiblast
Index a BLAST database
Database name: ecoli
Database directory [.]:
Wildcard database filename [ecoli]: ecoli.*
Release number [0.0]:
Index date [00/00/00]: 07/08/02
         N : nucleic
         P : protein
         ? : unknown
Sequence type [unknown]: N
         1 : wublast and setdb/pressdb
         2 : formatdb
         0 : unknown
Blast index version [unknown]: 2

   EMBOSS An error in dbiblast.c at line 640:
 cannot open ./ecoli.nt.nhr table file ./ecoli.nt.nhr.nin

Does anybody have some ideas? Thank you very much in advance.

Grace