No subject
Gebhard Kaiser
gkaiser at facstaff.wisc.edu
Thu Aug 22 22:25:31 UTC 2002
Hello
1. I have got problens configuring my databases may someone can help me with
it.
2. I am very new in Bioinformatics. Is their any kind of an "how-to-do" what
explains essential things like fileformats etc. . I tryed to to index some
gcg files as well but dbigcg asked for some *.ref files what is this, what is
UFO; a coordinate file is the same like *.pdb?
Thank you
Gebhard
------------------------------------------------------------------------------------------
Here is what you may need for 1.:
### this is the warning:
schleppi:/ # infoseq
Displays some simple information about sequences
Input sequence(s): askn:*
Warning: Cannot open division file '<null>' for database 'askn'
Error: Unable to read sequence 'askn:*'
### the part of my emboss.default:
DB askn [
type: N
method: emblcd
format: fasta
dir: $emboss_db_dir/ask
file: askn.fasta
comment: "ASKxx_atxgxxxxx-sp/usp" ]
### ls of $emboss_db_dir/askn: (dbifasta did not give me any warnings)
. .. acnum.hit acnum.trg askn.fasta division.lkp entrynam.idx
### askn.fasta it self:
>ASK01_at1g75950-sp
ATGTCTGCGAAGAAGATTGTGTTGAAGAGTTCCGATGGTGAATCTTTCGAGGTTGAGGAGGCGGTGGCTCTCGAGTCACAAACCATAGCGCATATGGTTGAAGACGACTGCGTCGACAACGGAGTCCCTCTTCCTAACGTCACGAGCAAGATCCTCGCCAAGGTGATCGAGTATTGCAAGAGGCACGTCGAGGCTGCTGCCTCTAAGGCCGAGGCCGTCGAGGGTGCTGCTACCTCCGATGACGATCTTAAGGCCTGGGACGCTGATTTTATGAAGATCGATCAAGCTACTCTCTTTGAACTCATTCTGGCTGCTAATTACCTGAATATCAAGAACTTGCTTGATCTAACATGTCAGACAGTTGCGGATATGATCAAAGGAAAGACTCCAGAAGAGATCCGCACAACGTTCAACATTAAGAACGACTTCACACCAGAGGAAGAGGAAGAGGTTCGCAGAGAGAACCAATGGGCTTTTGAATGA
>ASK02_at5g42190-sp
ATGTCGACGGTGAGAAAAATCACTCTTAAGAGTTCGGATGGCGAAAACTTCGAAATTGACGAAGCGGTGGCGCTAGAGTCACAAACCATCAAACATATGATTGAAGATGACTGTACCGATAATGGTATCCCTCTCCCTAATGTCACAAGCAAGATCCTTTCGAAGGTGATTGAGTACTGTAAGAGACATGTCGAAGCTGCTGAGAAATCCGAAACCACGGCCGATGCTGCTGCTGCTACTACTACCACCACCGTCGCGTCGGGTTCTAGTGATGAAGATCTCAAGACTTGGGATTCTGAGTTTATCAAAGTTGATCAGGGCACTCTCTTCGATCTTATCCTGGCTGCTAACTACTTGAATATCAAGGGACTGTTGGACTTGACTTGCCAGACAGTGGCTGATATGATTAAAGGAAAAACCCCAGAAGAAATCCGTAAGACGTTCAATATCAAGAACGACTTCACGCCAGAGGAAGAAGAAGAGGTTCGCCGTGAGAATCAGTGGGCGTTTGAATGA
>ASK03_at3g25700-sp
ATGGCAGAAACGAAGAAGATGATCATCCTCAAGAGCTCCGACGGTGAATCCTTCGAGGTCGAGGAAGCCGTCGCGGTCGAGTCCCAGACGATTAAGCACATGATCGAGGACGACTGCGTCGATAACGGAATTCCACTTCCCAATGTCACCGGAGCCATCCTCGCGAAGGTTATCGAGTACTGCAAGAAACACGTTGAAGCCGCTGCTGAGGCTGGTGGAGACAAGGATTTCTATGGTTCCACCGAGAACCACGAGCTCAAGACTTGGGACAACGATTTCGTCAAAGTTGATCATCCTACTCTCTTCGATCTCCTTCGGGCTGCCAACTATTTGAACATCAGTGGACTTCTTGACCTTACGTGCAAGGCCGTGGCTGATCAGATGAGAGGCAAAACTCCAGCGCAGATGCGTGAACACTTCAACATCAAGAACGACTACACACCTGAGGAAGAGGCCGAGGTTCGCAATGAGAACAGGTGGGCGTTCGAGTGA
>ASK04_at1g20140-sp
ATGGCAGAAACGAAGAAGATGATCATCCTTAAGAGCTCCGACGGTGAATCCTTCGAGATCGAGGAAGCCGTCGCTGTTAAGTCCCAGACGATTAAGCACATGATTGAGGACGACTGTGCCGATAACGGAATTCCACTTCCCAATGTCACCGGAGCCATCCTCGCCAAGGTTATTGAGTATTGCAAGAAGCACGTTGAAGCCGCTGCTGAAGCTGGTGGAGACAAGGATTTCTATGGTTCCGCTGAGAACGACGAGCTTAAGAATTGGGACAGCGAATTCGTCAAAGTCGATCAGCCTACTCTCTTCGATCTCATCTTGGCTGCGAACTATTTGAACATCGGTGGACTTCTTGACCTTACGTGCAAGGCCGTGGCTGATCAGATGAGAGGCAAAACTCCAGAGCAGATGCGTGCACACTTCAACATCAAGAACGATTACACACCTGAGGAAGAGGCGGAGGTTCGCAATGAGAACAAGTGGGCGTTCGAGTGA
>ASK05_at3g60020-sp
ATGTCGACGAAGATCATGTTGAAGAGCTCCGATGGTAAATCGTTCGAGATCGACGAAGACGTGGCACGCAAATCAATCGCGATAAACCATATGGTTGAGGACGGCTGCGCCACTGATGTAATACCGCTTCGAAACGTCACAAGCAAGATTCTCAAGATTGTGATCGATTATTGCGAGAAGCACGTCAAGAGCAAAGAAGAAGAAGATCTCAAGGAGTGGGACGCTGATTTCATGAAGACGATCGAAACAACCATTCTCTTTGATGTTATGATGGCTGCGAATTATCTCAATATTCAAAGCCTTCTTGATCTCACATGTAAAACTGTCTCGGATTTGCTCCAGGCTGATTTGCTCTCAGGGAAAACTCCAGATGAGATTCGCGCGCACTTCAACATCGAGAACGATCTAACAGCAGAGGAAGTAGCTAAGATTCGTGAGGAGAATCAATGGGCTTTTCAATGA
>ASK06_at3g53060-sp
ATGGCAGAAGACGATTGTGCCGATAATGGAATCCCTCTTCCAAACGTGACAAGCAAGATACTCTTATTGGTGATCGAGTATTGCAAGAAGCACGTCGTTGAGAGCAAAGAAGAAGATCTAAAGAAGTGGGACGCTGAATTCATGAAGAAGATGGAACAATCGATTCTCTTTGATGCAAAACTCCAGGCGAGATTCGCTCATACTTCAATATCGAGAACGATTTCACAGCAGAGGGAGAAGCTGAGATCCGCAAGGTGA
>ASK07_at3g21840-sp
ATGTCGACGAAGAAGATCATATTGAAGAGCTCCGATGGTCACTCATTCGAGGTCGAAGAAGAGGCCGCACGCCAATGCCAGATTATCATAGCTCATATGAGTGAAAATGATTGTACCGATAATGGAATCCCTCTTCCAAACGTGACAGGCAAGATTCTTGCGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGATGATCTCAAGAAGTGGGACAAGGAGTTCATGGAAAAAGATACATCCACGATCTTTGATCTCATCAAGGCTGCGAATTACCTAAACATCAAAAGCCTTTTTGATCTAGCATGCCAAACCGTCGCGGAAATCATCAAAGGCAACACTCCTGAGCAGATTCGCGAATTCTTCAACATTGAGAATGATTTAACACCTGAGGAAGAAGCAGCGATTCGTAGGGAGAATAAATGGGCTTTTGAATGA
>ASK08_at3g21830-sp
ATGTCGACGAAAAAGATCATGTTGAAGAGCTCCGAGGGTAAAACGTTTGAGATTGAAGAAGAGACCGCACGCCAATGCCAGACCATAGCTCATATGATTGAAGCCGAATGTACAGATAACGTAATCCTGGTTTTAAAGATGACAAGCGAGATTCTTGAGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGATGATCTCGAGAAGTGGGACAAGGAGTTCATGGAAAAAGATAAATCCACGATCTTTGCTCTCACCAATGCTGCGAATTTCCTAAACAACAAAAGCCTTCTTCATCTAGCAGGCCAAACCGTCGCGGATATGATCAAAGGCAACACTCCGAAGCAGATGCGCGAATTCTTCAACATTGAGAATGATTTAACACCTGAGGAAGAAGCAGCGATTCGTAGGGAGAATAAATGGGCTTTTGAATGA
>ASK09at3g21850-sp
ATGTCGACGAAAAAGATCATGTTGAAGAGCTCCGAGGGTAAAACGTTTGAGATTGAAGAAGAGACCGCACGCCAATGCCAGACCATAGCTCATATGATTGAAGCCGAATGTACAGATAACGTAATCCTGGTTTTAAAGATGACAAGCGAGATTCTTGAGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGATGATCTCGAGAAGTGGGACAAGGAGTTCATGGAAAAAGATAAATCCACGATCTTTGCTCTCACCAATGCTGCGAATTTCCTAAACAACAAAAGCCTTCTTCATCTAGCAGGCCAAACCGTCGCGGATATGATCAAAGGCAACACTCCGAAGCAGATGCGCGAATTCTTCAACATTGAGAATGATTTAACACCTGAGGAAGAAGCAGCGATTCGTAGGGAGAATAAATGGGCTTTTGAATGA
>ASK10_at3g21860-sp
ATGTCGACGAAGAAGATCATATTGAAGAGCTCCGATGGTCACTCATTCGAGGTCGAAGAAGAGGCCGCATGCCAATGCCAGACCATAGCTCATATGAGTGAAGACGATTGTACCGATAATGGAATCCCGCTTCCAGAAGTGACAGGCAAGATTCTTGAGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGAGGATCTCAAGAAGTGGGACAAGGAATTCATGGAAAAATATCAATCCACGATCTTTGATCTCATTATGGCTGCGAATTACCTAAACATCAAAAGCCTTCTTGATCTAGCATGCCAAACCGTCGCGGATATGATCAAAGACAACACTGTGGAGCACACTCGCAAATTCTTCAACATTGAGAATGATTATACACATGAGGAAGAAGAAGCGGTTCGTAGGGAGAATCAATGGGGTTTTGAATGA
>ASK11_at4g34210-sp
ATGTCTTCGAAGATGATCGTGTTGATGAGCTCCGATGGTCAGTCGTTTGAGGTGGAAGAAGCGGTAGCAATCCAATCGCAGACCATAGCGCATATGGTTGAAGACGATTGCGTTGCTGATGGAATCCCTCTTGCAAACGTGGAAAGCAAGATTCTTGTGAAAGTGATCGAGTACTGCAAGAAACACCACGTCGACGAGGCTAATCCTATCTCTGAAGAGGATCTCAACAACTGGGACGAGAAGTTCATGGATCTCGAACAATCCACCATCTTTGAACTCATCCTTGCTGCGAATTACCTCAACATAAAAAGCTTGCTTGATCTCACATGCCAAACTGTTGCGGACATGATCAAAGGCAAGACTCCAGAGGAGATTCGTTCAACTTTCAACATTGAGAATGATTTTACACCTGAGGAAGAAGAAGCTGTTCGTAAGGAGAATCAATGGGCTTTTGAATGA
>ASK12_at4g34470-sp
ATGTCTTCGAAGATGATCGTGTTGATGAGCTCCGATGGTCAGTCGTTTGAGGTGGAAGAAGCGGTAGCAATCCAATCGCAGACCATAGCGCATATGGTTGAAGACGATTGCGTTGCTGATGGAATCCCTCTTGCAAACGTGGAAAGCAAGATTCTTGTGAAAGTGATCGAGTACTGCAAGAAATACCACGTCGACGAGGCTAATCCTATCTCTGAAGAGGATCTCAACAAGTGGGACGAGAAGTTCATGGATCTCGAACAATCCACCATCTTTGAACTCATCCTTGCTGCGAATTACCTCAACATAAAAAGCTTGTTTGATCTCACATGCCAAACTGTTGCGGACATGATCAAAGGCAAGACTCCAGAGGAGATTCGTTCAACTTTCAACATTGAGAATGATTTTACACCTGAGGAAGAAGAAGCTGTTCGTAAGGAGAATCAATGGGCTTTTGAATGA
>ASK13_at3g60010-sp
ATGTCGAAGATGGTTATGTTGCTGAGCTCCGATGGTGAATCTTTCCAGGTCGAAGAAGCAGTCGCGGTCCAGTCACAGACGATAGCACATATGATTGAAGACGATTGCGTCGCCAATGGAGTCCCTATCGCAAACGTTACAGGAGTCATCCTCTCGAAGGTGATCGAGTATTGCAAGAAACACGTCGTTTCTGATTCACCAACCGAAGAGAGCAAAGACGAACTCAAGAAGTGGGACGCTGAGTTCATGAAGGCCCTGGAACAGTCGTCGACTCTCTTTGATGTTATGCTGGCTGCGAATTACCTAAACATAAAAGACCTGCTTGACCTTGGTTGCCAAACTGTTGCTGACATGATCACTGGCAAGAAACCAGACGAGATTCGTGCACTTCTTGGCATCGAGAACGATTTTACACCGGAGGAGGAAGAGGAGATTCGTAAGGAGAATCAATGGGCTTTTGAATGA
>ASK14_at2g03170-sp
ATGTCTTCCAACAAGATTGTTTTGTCTAGCTCCGATGGCGAATCTTTCGAGGTTGAAGAAGCGGTGGCAAGAAAACTGAAAATCGTGGAACACATGATTGAAGACGACTGTGTTGTTACCGAGGTCCCTCTTCAAAACGTCACCGGAAAGATCCTCTCCATTGTTGTCGAGTATTGCAAGAAACACGTCGTTGACGAAGAAAGCGACGAGTTCAAGACTTGGGACGAAGAGTTCATGAAGAAATTTGATCAGCCTACGGTCTTCCAACTCTTGCTCGCTGCTAACTATCTCAATATCAAAGGCCTTCTTGATCTCTCTGCTCAAACCGTTGCAGATCGCATCAAAGATAAGACTCCAGAGGAAATTCGAGAAATCTTCAACATCGAGAACGATTTCACACCCGAAGAAGAAGCAGCGGTTCGCAAGGAAAACGCATGGGCTTTTGAATAG
>ASK15_at3g25650-sp
ATGTCTTCTAACAAGATTGTGTTGACTAGTTCCGATGGCGAGTCTTTCCAAGTTGAGGAAGTGGTGGCACGAAAACTGCAGATCGTAAAGCACCTGCTCGAAGACGACTGTGTTATTAACGAAATCCCTCTTCAAAACGTTACAGGAAATATTCTCTCCATCGTTCTCGAGTATTGCAAGAAACACGTCGACGATGTGGTCGATGATGATGCATCTGAGGAGCCGAAGAAGAAGAAGCCCGATGATGAGGCGAAGCAGAATCTCGATGCTTGGGACGCAGAGTTCATGAAAAATATTGATATGGAAACAATCTTCAAGCTCATTCTCGCTGCTAACTATCTCAACGTCGAAGGTCTTCTTGGTCTCACTTGCCAGACTGTTGCAGATTACATCAAAGATAAGACGCCAGAGGAAGTTCGAGAACTCTTTAATATCGAGAATGATTTCACACATGAAGAAGAAGAAGAAGCGATTCGCAAGGAGAACGCTTGGGCTTTTGAGGCTGACACAAAACACGAAGATCCAAAGCCCTAG
>ASK16_at2g03190-sp
ATGTCTTCGAACAAGATTGTGTTGACTAGCTCGGATGATGAATCGTTCGAGGTTGAGGAAGCGGTGGCTCGTAAATTGAAGGTCATAGCACACATGATCGATGACGACTGCGCCGATAAAGCAATCCCGCTTGAAAACGTCACCGGAAATATCCTCGCTTTGGTTATCGAGTATTGCAAGAAACACGTACTTGATGATGTTGATGATAGTGATGATTCTACTGAAGCAACAAGCGAAAATGTAAACGAGGAAGCCAAGAACGAGCTCAGGACTTGGGACGCAGAGTTCATGAAAGAATTTGATATGGAAACAGTCATGAAACTCATTCTCGCTGTTAATTATCTCAACGTCCAAGATCTTCTTGGTCTCACTTGCCAGACCGTTGCAGATCACATGAAAGATATGTCGCCAGAGGAAGTTCGAGAACTCTTTAACATTGAGAATGATTACACACCTGAAGAAGAAGACGCGATTCGTAAGGAAAACGCTTGGGCTTTTGAGGATCTAAAGTAA
>ASK17_at2g20160-sp
ATGTCTTCGAAGAAGATTGTGTTGACTAGCTCCGATGATGAATGTTTTGAGATTGACGAAGCGGTGGCTCGTAAGATGCAGATGGTAGCGCACATGATCGATGACGATTGCGCCGATAAAGCAATCCGGCTTCAAAACGTCACTGGAAAGATCCTCGCTATCATTATCGAGTATTGCAAGAAACACGTTGATGATGTTGAAGCCAAGAATGAGTTCGTGACTTGGGACGCAGAGTTCGTGAAAAACATTGATATGGATACACTCTTCAAACTCCTTGACGCTGCTGACTATCTCATCGTCATAGGTCTCAAGAATCTCATTGCCCAGGCCATTGCAGATTACACTGCAGATAAGACGGTAAATGAGATTCGAGAACTCTTTAACATCGAGAACGATTACACACCTGAGGAAGAAGAAGAGCTTCGCAAGAAGAACGAATGGGCTTTCAATTAA
>ASK18_at1g10230-sp
ATGTCTTCTAACAAGATTTTGTTGACGAGTTCCGATGGCGAGTCTTTCGAGATCGACGAAGCGGTGGCGCGTAAGTTTCTGATCATAGTGCACATGATGGAGGATAACTGCGCCGGTGAAGCAATTCCGCTTGAAAATGTCACCGGGGATATCCTCTCCAAGATAATCGAGTACGCGAAGATGCACGTCAATGAACCTAGTGAAGAAGACGAAGACGAGGAGGCGAAGAAGAATCTAGACTCGTGGGACGCTAAGTTCATGGAAAAGCTAGATCTGGAGACCATCTTCAAAATCATTCTCGCTGCCAACTACCTAAACTTCGAAGGACTTCTCGGTTTCGCTAGCCAGACGGTTGCTGATTACATCAAGGACAAAACACCAGAGGAAGTACGAGAGATTTTCAACATCGAGAACGATTTCACGCCTGAAGAAGAGGAAGAGATTCGCAAGGAGAATGCTTGGACTTTTAATGAGTAA
>ASK19_at2g03160-sp
ATGTCTTCGAAAAAGATTGTGTTGACAAGCTCCGATGGTGAATCTTTCAAGGTTGAAGAAGTGGTGGCAAGAAAACTGCAGATCGTAGGACACATTATCGAAGACGACTGTGCTACAAACAAAATCCCTATTCCAAACGTTACCGGAGAGATTCTCGCCAAGGTTATCGAGTACTGCAAGAAACACGTTGAAGACGATGATGACGTGGTGGAGACGCATGAATCATCGACGAAAGGAGATAAAACAGTTGAGGAGGCGAAGAAGAAGCCTGATGATGTGGCCGTACCTGAATCAACTGAAGGAGATGATGAAGCTGAGGATAAGAAGGAGAAGCTTAATGAGTGGGATGCAAAGTTCATGAAGGATTTCGATATTAAGACGATCTTCGACATTATTCTGGCTGCTAACTATCTCAACGTCCAAGGTCTTTTTGATCTCTGTAGCAAGACCATTGCAGATTACATAAAAGATATGACGCCAGAGGAAGTTCGAGAACTCTTTAACATCGAGAATGATTTCACACCTGAAGAAGAAGAAGCAATTCGCAATGAAAACGCTTGGACTTTTGAGCAAGATGGAAAACAACAAGTTCCAAAACCCTAG
>ASK01_at1g75950-usp
aaataaaaataaatgttcaaaaaacatgatcttaaagctgacaaagctgatttgattgactaatacttatcctacggtgatttttggttcttttactttttttgacaattatggagctggatggaaaaaaaatatatataaaatcatatattattaataatgagataaatacaacgaattaaacggatcaaagttaatatttccaaaagaaaaatagaacagagtcctaatttcattaatttcaactattgaaaacaaaatttaaaatcaataggattgatttctatttttcttttagaaaaacaaaatttgaaacaatttcctaatttccctaaacttgcgactttttaacaatcgaccgacttatcaaaattagggattgttttatatataaagagagacgcatctctttatttcattcatcgcttctccaaaattttcttcaaagaacaaatctcccaaatctaaaatctttctcttctctcttcgtttccataaccATGTCTGCGAAGAAGATTGTGTTGAAGAGTTCCGATGGTGAATCTTTCGAGGTTGAGGAGGCGGTGGCTCTCGAGTCACAAACCATAGCGCATATGGTTGAAGACGACTGCGTCGACAACGGAGTCCCTCTTCCTAACGTCACGAGCAAGATCCTCGCCAAGGTGATCGAGTATTGCAAGAGGCACGTCGAGGCTGCTGCCTCTAAGGCCGAGGCCGTCGAGGGTGCTGCTACCTCCGATGACGATCTTAAGGCCTGGGACGCTGATTTTATGAAGATCGATCAAGCTACTCTCTTTGAACTCATTCTGgtatgtttcttctctcgatctgatttgatttttccatcgaattttgaattttgggattctagggttttcgatttgggaaaattagggtttcgaaatttaggtgtttgtttcagaaattgaatctgcttgagattgatattgttagggttcttatggaaccaatcattaattgaatctatcg
atttggat
>ASK02_at5g42190-usp
aaaaaaaaataagaaaaataaaataaaaaataaataagttttgtcgtaacggtggacttggtttctagaatgtggatgattttaatacaacttaattagcaaaacaactgccgcaattgattatgattcttaactctttatttgcaaagatgttcaaagaaaaatattaccggaaatcaaatcacatgaatccaattaaattatacacaccatcctacaaatagaggagtttagtatctgttcaactactgattaatcaaaagttgatgaaaagagttgaattaattttcaggtgttttcctttgaaagaaaaaaacagagaaaatgttttaaaatgaaaatttataggtaaaaaaagtcaattgggaatcgttagatctcactggttcaatgtgtgagccgggctttaaaaacattttgatttaacccatacacacatctctctgttccacgattctcttcctcagcctccacgtcgtctctaaactcagcaaaaaccaATGTCGACGGTGAGAAAAATCACTCTTAAGAGTTCGGATGGCGAAAACTTCGAAATTGACGAAGCGGTGGCGCTAGAGTCACAAACCATCAAACATATGATTGAAGATGACTGTACCGATAATGGTATCCCTCTCCCTAATGTCACAAGCAAGATCCTTTCGAAGGTGATTGAGTACTGTAAGAGACATGTCGAAGCTGCTGAGAAATCCGAAACCACGGCCGATGCTGCTGCTGCTACTACTACCACCACCGTCGCGTCGGGTTCTAGTGATGAAGATCTCAAGACTTGGGATTCTGAGTTTATCAAAGTTGATCAGGGCACTCTCTTCGATCTTATCCTGgtttgtcaaacttatttttaattgctttggttttcaaagtttgcgatttcatttctagggtttgagatcttgatttctgtttgagatctaattttagggttcaggttttgtttagattgccaatttcacagtttaaactatgatcatg
tctgattg
>ASK03_at3g25700-usp
tgttggttaccaatttttacattttcattgatattcactacaaaatacacaaataataattaattcataatctatgtgaacgtggaggtttacttttattaaaacataagaccctagtcaatgattttttcacacgtagtagatgattaactgtattttctgaaatcagatacgggtaaatctggaaagtaaatattattactaaggttgagcttttggaaaagtaaaaatatttctctttaaaagaaaaaaataataaagattttgttacttaaaattccaatatttgtttcccttttattgttttcctattattaaaaggattagattaacataaaagcaatcaaccgactttaattaccaagtaagaaattgtttttacatagatctataaatagggcaccaacttcccaaaccttgagaccatcacacaattcacaatcaatcgcagagccgattctcttcaaaacttgtctagtcctttgtccttgttgcaaacgATGGCAGAAACGAAGAAGATGATCATCCTCAAGAGCTCCGACGGTGAATCCTTCGAGGTCGAGGAAGCCGTCGCGGTCGAGTCCCAGACGATTAAGCACATGATCGAGGACGACTGCGTCGATAACGGAATTCCACTTCCCAATGTCACCGGAGCCATCCTCGCGAAGGTTATCGAGTACTGCAAGAAACACGTTGAAGCCGCTGCTGAGGCTGGTGGAGACAAGGATTTCTATGGTTCCACCGAGAACCACGAGCTCAAGACTTGGGACAACGATTTCGTCAAAGTTGATCATCCTACTCTCTTCGATCTCCTTCGGgttagtaatgtctttttctttgttttttggttttatgtttttagaattagggttttttatattttttccatgactatgttagggttttatttatattattgaatgttgtgttttgatttggagactaatcgtcttggtttataaagGCTGCCAACTATTTGAACATCAGTGG
ACTTCTTG
>ASK04_at1g20140-usp
tattcactacaaaatacccaaataataattcataatttcacatagatttttacatacaaacgtggaggttttctttgattaaaacataaaaaccctagtcaatgatttttgcacacgtagataaactgtattttctgaaatcagatgtaaatctgaaaaagtaaatattattaacggaatacagctaaggtgaagtttgtggaaaagtaaaaatatttactttatttaaaacaacataaattttccattttttaaaaacttaaatttccaatatttgttttactttttactgttctcctattagtaaaaggagtagattaacttaaaagcaataagccggcaaaaaaaaaaaaacttaaaagcaataaaccgacttgaataccaattaagaaattggctataaataaggctccaacttcccaaaccttgacaccatcacaacaatcaatcgcagcgccgattctccttcaaaaacttttcctaagtcgtcactttttacgATGGCAGAAACGAAGAAGATGATCATCCTTAAGAGCTCCGACGGTGAATCCTTCGAGATCGAGGAAGCCGTCGCTGTTAAGTCCCAGACGATTAAGCACATGATTGAGGACGACTGTGCCGATAACGGAATTCCACTTCCCAATGTCACCGGAGCCATCCTCGCCAAGGTTATTGAGTATTGCAAGAAGCACGTTGAAGCCGCTGCTGAAGCTGGTGGAGACAAGGATTTCTATGGTTCCGCTGAGAACGACGAGCTTAAGAATTGGGACAGCGAATTCGTCAAAGTCGATCAGCCTACTCTCTTCGATCTCATCTTGgttagtaaagtcgctttcattgtttaggtttgatgttgttagaattagggtttttaatttggggatttaggtttgattttgcaggattctgttagggttttagtgtgttgaatgtcgttttgatttgactaatcgttttggttctttggtttgtacagGCTGCGAACTATTT
GAACATCG
>ASK05_at3g60020-usp
gtgttggtgtgaaatctacgagtgtaattttatgtaacgtttaattatttttactagaatatgtatcattcagctttacaagattatatgtaatgtagctttatctgatgttaaacccccgaatttgtataactacgtttttgtgtgtttgttacattttgtactttgtctttgatggcaaatcttgaagtgagtgagaataacaacaaatcacataaaacaccaaccaaatcctttttttcttttgacatttaatccatctcgatcaagttttgggccgaatctacgaaactgggccaattgtaaaattcgacccggttcagcttggtttactccactgaaaatgttgatcccaccgactctgacagttggagcttataaatacacagacgcatagattcataagttcgttacatcatttttcttcaaatcgctctctaaattcttcttcaatcttgtttcatcaaccttgctttccagagaaaaatcgctccataacaATGTCGACGAAGATCATGTTGAAGAGCTCCGATGGTAAATCGTTCGAGATCGACGAAGACGTGGCACGCAAATCAATCGCGATAAACCATATGGTTGAGGACGGCTGCGCCACTGATGTAATACCGCTTCGAAACGTCACAAGCAAGATTCTCAAGATTGTGATCGATTATTGCGAGAAGCACGTCAAGAGCAAAGAAGAAGAAGATCTCAAGGAGTGGGACGCTGATTTCATGAAGACGATCGAAACAACCATTCTCTTTGATGTTATGATGGCTGCGAATTATCTCAATATTCAAAGCCTTCTTGATCTCACATGTAAAACTGTCTCGGATTTGCTCCAGGCTGATTTGCTCTCAGGGAAAACTCCAGATGAGATTCGCGCGCACTTCAACATCGAGAACGATCTAACAGCAGAGGAAGTAGCTAAGATTCGTGAGGAGAATCAATGGGCTTTTCAATGAgagagcggatcatcaaagttgttgatgc
aaatctac
>ASK06_at3g53060-usp
gtttcctactttacacgtttgttacattttttctctttgttgcaaaccccaaatgtgtatgtgccatacaatatcaatcatctttgccatattttatcgaactgtttataggttactcaatatttttctcctcaaaaaatgtgaagactgacacgtaccaaatcttttaagtgagaatcacaacaaatcacataaaacaccaaccaattccattctttttcctcttttgacacactttaatccaaatctgatcaagttttggggccacattgcaaaattggggcccgttgtaagttttggtcccaatctgaaaatgcatatcccaccgactctgacaattagggcttataaataaacgagcacataagttcataacttggttacttcattattcttccatctttttcatcaaattgctaagagagtaaaatcgccccataacgaagtaaccatgtcgaagaagataatcgtgttgacaagctccgatgatgataaagggtATGGCAGAAGACGATTGTGCCGATAATGGAATCCCTCTTCCAAACGTGACAAGCAAGATACTCTTATTGGTGATCGAGTATTGCAAGAAGCACGTCGTTGAGAGCAAAGAAGAAGATCTAAAGAAGTGGGACGCTGAATTCATGAAGAAGATGGAACAATCGATTCTCTTTGATgttatgatggctgcgaattatctcaatatccaaagccttcttgatctcacattttcaaactgtcgctgatttgctctcagGCAAAACTCCAGGCGAGATTCGCTCATACTTCAATATCGAGAACGATTTCACAGCAGAGGGAGAAGCTGAGATCCGCAAGGTGAatcaatgggcttttgaatgaaagtggatcttcaaagttctttcttctttagtgttttcggttttcttgatgcgatgttagatgattacttcgtctatttcttgtttgttctgttgtttcttttcttttggtttcttgatgcataagtaaacc
aatgtttg
>ASK07_at3g21840-usp
gtagataaaaaaaaaaaaagaattacatagaaacttaggagtaaacactgtaaaacacgaatttccaaaaaaaaaaaaagaagttgtagttataatttaaaagacacatataaaaaataatttagtggaaattaaaacaacataacatgagtagataacttaatgattgtgtgacttacttgacacgatacatcatacatgtatctatgaaagttagggcttacatactaacttacaagtaaacacatgaaaaagttgtggttttaatcaaaaagacacataaaaaaagactttagtggaagaacaacatcaacatgagtagacatacaatacaacttcaagctttcgtgacttacttgacacgatacatgcatatatgaaagttattagggcttataaatagacaaacgcataggttcataacttcattaccttattactcaatcatttactcaattcttcaatcttccagagaaaaaatctcccccactgaaaaaataATGTCGACGAAGAAGATCATATTGAAGAGCTCCGATGGTCACTCATTCGAGGTCGAAGAAGAGGCCGCACGCCAATGCCAGATTATCATAGCTCATATGAGTGAAAATGATTGTACCGATAATGGAATCCCTCTTCCAAACGTGACAGGCAAGATTCTTGCGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGATGATCTCAAGAAGTGGGACAAGGAGTTCATGGAAAAAGATACATCCACGATCTTTGATCTCATCAAGGCTGCGAATTACCTAAACATCAAAAGCCTTTTTGATCTAGCATGCCAAACCGTCGCGGAAATCATCAAAGGCAACACTCCTGAGCAGATTCGCGAATTCTTCAACATTGAGAATGATTTAACACCTGAGGAAGAAGCAGCGATTCGTAGGGAGAATAAATGGGCTTTTGAATGAgcggattatcaaaacctaaacagctttc
tttctttt
>ASK08_at3g21830-usp
aagaagaattatatagaaacttaggagtaaacactgtaaaacacgaattttctaattaaaaaaaaagttgtagttataatctaaaagacacatagaaaaatactttagtggaaattaaaacaacataacatgagtagataacttaatgattttgtgacttacttgacacgatacatcatacatgtatctatgaaagttagggcttacatactaacttacaagtaaacacataaaaatgttgtggttttaatcaaaaagacacataaaaaaaagacttaatggaagaacaacatcaacatgagtagacatacaacttcatgctttcgtgacttacttgacacgatacatgcatctatgaaagttagggcttataaatagacaagactcataggttcataacttcattaccttattactcaatcattttctcaattcttcaatctttcatcaaaatttcttccagagaaaaaaaacaaatctcccccacaaagaaaacaacaATGTCGACGAAAAAGATCATGTTGAAGAGCTCCGAGGGTAAAACGTTTGAGATTGAAGAAGAGACCGCACGCCAATGCCAGACCATAGCTCATATGATTGAAGCCGAATGTACAGATAACGTAATCCTGGTTTTAAAGATGACAAGCGAGATTCTTGAGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGATGATCTCGAGAAGTGGGACAAGGAGTTCATGGAAAAAGATAAATCCACGATCTTTGCTCTCACCAATGCTGCGAATTTCCTAAACAACAAAAGCCTTCTTCATCTAGCAGGCCAAACCGTCGCGGATATGATCAAAGGCAACACTCCGAAGCAGATGCGCGAATTCTTCAACATTGAGAATGATTTAACACCTGAGGAAGAAGCAGCGATTCGTAGGGAGAATAAATGGGCTTTTGAATGAgcggattatcaaaacctaaacagctttcttt
cttttctt
>ASK09at3g21850-usp
gtagataaaaaaaaaaaaagaattacatagaaacttaggagtaaacactgtaaaacacgaatttccaaaaaaaaaaaaagaagttgtagttataatttaaaagacacatataaaaaataatttagtggaaattaaaacaacataacatgagtagataacttaatgattgtgtgacttacttgacacgatacatcatacatgtatctatgaaagttagggcttacatactaacttacaagtaaacacatgaaaaagttgtggttttaatcaaaaagacacataaaaaaagactttagtggaagaacaacatcaacatgagtagacatacaatacaacttcaagctttcgtgacttacttgacacgatacatgcatatatgaaagttattagggcttataaatagacaaacgcataggttcataacttcattaccttattactcaatcatttactcaattcttcaatcttccagagaaaaaatctcccccactgaaaaaataATGTCGACGAAGAAGATCATATTGAAGAGCTCCGATGGTCACTCATTCGAGGTCGAAGAAGAGGCCGCACGCCAATGCCAGATTATCATAGCTCATATGAGTGAAAATGATTGTACCGATAATGGAATCCCTCTTCCAAACGTGACAGGCAAGATTCTTGCGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGATGATCTCAAGAAGTGGGACAAGGAGTTCATGGAAAAAGATACATCCACGATCTTTGATCTCATCAAGGCTGCGAATTACCTAAACATCAAAAGCCTTTTTGATCTAGCATGCCAAACCGTCGCGGAAATCATCAAAGGCAACACTCCTGAGCAGATTCGCGAATTCTTCAACATTGAGAATGATTTAACACCTGAGGAAGAAGCAGCGATTCGTAGGGAGAATAAATGGGCTTTTGAATGAgcggattatcaaaacctaaacagctttc
tttctttt
>ASK10_at3g21860-usp
tggaacatttgtggtattaagtgaaaacaaagagatctcgacatgccgtgtaataatattaagatcaattaattgcgtaagacgtgatatttatgcatgcatttatagaaactttgaagacgcgttatgtgtataaaacaacatcatagtgcatttttaataaaaaaagtttatttggaatatttgagtaggtggttagtccaatatataaaattgaattacatataatcttacaagtaaacacgataaaaagttgtggttttagctttaaaagactttagtggaaaacaacatcaacatgagtagacataaaacttcaagctttcgtgacttgcttgacacgatacatgcatctatgaaaattattagggcttattaatagacaaacgcataggttcataacttcattaccttattactgaaatccttctctcaattctcaatcattttctcaattcttcaatcttccagagaaaaaatctccccccagcgaaaaaataATGTCGACGAAGAAGATCATATTGAAGAGCTCCGATGGTCACTCATTCGAGGTCGAAGAAGAGGCCGCATGCCAATGCCAGACCATAGCTCATATGAGTGAAGACGATTGTACCGATAATGGAATCCCGCTTCCAGAAGTGACAGGCAAGATTCTTGAGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGAGGATCTCAAGAAGTGGGACAAGGAATTCATGGAAAAATATCAATCCACGATCTTTGATCTCATTATGGCTGCGAATTACCTAAACATCAAAAGCCTTCTTGATCTAGCATGCCAAACCGTCGCGGATATGATCAAAGACAACACTGTGGAGCACACTCGCAAATTCTTCAACATTGAGAATGATTATACACATGAGGAAGAAGAAGCGGTTCGTAGGGAGAATCAATGGGGTTTTGAATGAgcgggtgaagcaaacactaagcagctttctt
tcttttct
>ASK11_at4g34210-usp
acattaaagtcaaaaacaattattatttttaaagaatattagtgatatattttacctttatgaaacattattaatatttaaacataaaaaattaaaatatcatgagacgggaagtatagcagaacgggtttggattgataggaaatacatcgagacgggtttggattgatataacacaggtaaaatatttattttattattttatcatcactaatttttttaattacaagattaatataaaattatataactttattactaaatataaaattataaaatttaaaattattatatatataaataaaatatttgtccgtagtgtaccacgcgttgaattataatatgttgttgtcaccgactctagctagggcttataaatacaaagacgcatagggtttcacaacttcatcaccttaacacaatttgttcgctctctaaattcttaaatctttcatcaaatttgcttcacagtgaaaaacctcctccacaaggaacacacaATGTCTTCGAAGATGATCGTGTTGATGAGCTCCGATGGTCAGTCGTTTGAGGTGGAAGAAGCGGTAGCAATCCAATCGCAGACCATAGCGCATATGGTTGAAGACGATTGCGTTGCTGATGGAATCCCTCTTGCAAACGTGGAAAGCAAGATTCTTGTGAAAGTGATCGAGTACTGCAAGAAACACCACGTCGACGAGGCTAATCCTATCTCTGAAGAGGATCTCAACAACTGGGACGAGAAGTTCATGGATCTCGAACAATCCACCATCTTTGAACTCATCCTTGCTGCGAATTACCTCAACATAAAAAGCTTGCTTGATCTCACATGCCAAACTGTTGCGGACATGATCAAAGGCAAGACTCCAGAGGAGATTCGTTCAACTTTCAACATTGAGAATGATTTTACACCTGAGGAAGAAGAAGCTGTTCGTAAGGAGAATCAATGGGCTTTTGAATGAgcccatgaatcaaaaccctaactagctttct
ttttcttt
>ASK12_at4g34470-usp
gacttcttttggtttcttataaatgaatctgaatattatctttggataaagtttcctatattccaatgtatatctatatccctcttaaattgttacattttacgccgtacctttataattgggcctattgtaaatttaaaccggtttagctggttcactttactgaatttacattttctgaaaataaggatttgagccgaacctacaacaaaaaaatgaaaatttgacccggtttattttggtttactcatctgaaattaccttttatgaaaaggagtcgacaaataatttacttattttcttcggttaaggaaaataactatttccttcttaaaaaaggaatggttgatctcaccgactctagctagggcttataaatacaaagacgcatagggtttcacaacttcatcaccttaacacaatttgttcgctctctaaattcttaaatctttcatcaaatttgcttcacagtgaaaaacctcctccacaaggaacacacaATGTCTTCGAAGATGATCGTGTTGATGAGCTCCGATGGTCAGTCGTTTGAGGTGGAAGAAGCGGTAGCAATCCAATCGCAGACCATAGCGCATATGGTTGAAGACGATTGCGTTGCTGATGGAATCCCTCTTGCAAACGTGGAAAGCAAGATTCTTGTGAAAGTGATCGAGTACTGCAAGAAATACCACGTCGACGAGGCTAATCCTATCTCTGAAGAGGATCTCAACAAGTGGGACGAGAAGTTCATGGATCTCGAACAATCCACCATCTTTGAACTCATCCTTGCTGCGAATTACCTCAACATAAAAAGCTTGTTTGATCTCACATGCCAAACTGTTGCGGACATGATCAAAGGCAAGACTCCAGAGGAGATTCGTTCAACTTTCAACATTGAGAATGATTTTACACCTGAGGAAGAAGAAGCTGTTCGTAAGGAGAATCAATGGGCTTTTGAATGAgcccatgaatcaaaaacctaactagctttct
ttttcttt
>ASK13_at3g60010-usp
aacacatgataaatttacgtgaccataattacttttcttcttttcttttgttttgaatgacataaacaaaatttgtagatatttttcttgctttcggagttttttaaaatatggaatatacacatgtaacgttttagaaagtttccatttttttttctttttacctcttttttgttggttcactcgttaaactcttgttacaattgtattgaattagagccgttcattatgacacgtagattcggatctgatttcctttttgtaccgaaattagatcaattgggactagatccatcaaaaacccggtttaggattggtttactcaactgaattttccttttaggttaaaatagtaatttcatccattatgaaaaaaggcaagaattataccgactctcacaattaggtctctctataaatacacaccttttgatatctctccatcatcgaaaaccttgtaaacaaaaatcgccaccacaaaaagaaaaaagaaggaaacgATGTCGAAGATGGTTATGTTGCTGAGCTCCGATGGTGAATCTTTCCAGGTCGAAGAAGCAGTCGCGGTCCAGTCACAGACGATAGCACATATGATTGAAGACGATTGCGTCGCCAATGGAGTCCCTATCGCAAACGTTACAGGAGTCATCCTCTCGAAGGTGATCGAGTATTGCAAGAAACACGTCGTTTCTGATTCACCAACCGAAGAGAGCAAAGACGAACTCAAGAAGTGGGACGCTGAGTTCATGAAGGCCCTGGAACAGTCGTCGACTCTCTTTGATGTTATGCTGGCTGCGAATTACCTAAACATAAAAGACCTGCTTGACCTTGGTTGCCAAACTGTTGCTGACATGATCACTGGCAAGAAACCAGACGAGATTCGTGCACTTCTTGGCATCGAGAACGATTTTACACCGGAGGAGGAAGAGGAGATTCGTAAGGAGAATCAATGGGCTTTTGAATGAttctttagttttctttttcgacgtt
agtgtgct
>ASK14_at2g03170-usp
ttagtagttattcaaataaaagtagaaaattaaaacctaataaactaaaagaacgcaactgattacaaaacttaatttatagactcttatcctataattagattaataattaatcaattaaattcaattctaagtaagatggacaaattaattaaataaataaaatgtcatacaaaattttcatagaaaatagccatgtttaggaaaaaaactctttttgtatgttaaataagtttctagaatctcctgataaactcttttactaagacgtcggtttttacttttaagcccaaaagttttaaggctaaacactagagatttggaagatttgcttttcttctcttccagtattgtgaaaaggaaaacacaattgaccgactcttaaaatattttataaatagacgccttcatcgactcctctctattccattcaatatctttgcataaatcataaccaatattattcttttcatcacccaaaatctcaaaaacgaacaaacATGTCTTCCAACAAGATTGTTTTGTCTAGCTCCGATGGCGAATCTTTCGAGGTTGAAGAAGCGGTGGCAAGAAAACTGAAAATCGTGGAACACATGATTGAAGACGACTGTGTTGTTACCGAGGTCCCTCTTCAAAACGTCACCGGAAAGATCCTCTCCATTGTTGTCGAGTATTGCAAGAAACACGTCGTTGACGAAGAAAGCGACGAGTTCAAGACTTGGGACGAAGAGTTCATGAAGAAATTTGATCAGCCTACGGTCTTCCAACTCTTGCTCGCTGCTAACTATCTCAATATCAAAGGCCTTCTTGATCTCTCTGCTCAAACCGTTGCAGATCGCATCAAAGATAAGACTCCAGAGGAAATTCGAGAAATCTTCAACATCGAGAACGATTTCACACCCGAAGAAGAAGCAGCGGTTCGCAAGGAAAACGCATGGGCTTTTGAATAGacaccaaaaccctagtttttggtttcgtttcttattgtcg
gttttagg
>ASK15_at3g25650-usp
acattgactcttttggatcaaaatggatggtacatatcttgtgatttataatttttagcttgttacaatcgtcattgcatagaacttatatgagtattatggattgatcttatatttaaacataaaaatatttttatacaaataaatactttataagtttccaagatataaatttgatattttatatagatatataaatataaaattttacaaataaatatctttctcttttgcggatccaataaaaggggttaatcccaacaaactagttaagttagaatttgcgttattttccttatttccttgagaaaaaggaaacaacatgaaacctaattctaattggaaaaggaaaacacaaattgaccgactcttaggatttctatagataaacacattcatcgactcttttatttttcattcaacaatctctcatcaaatttctctgcacaaaaaataaaagcaaaaacttattttttcgtttaacacacaaagcaaacaaaATGTCTTCTAACAAGATTGTGTTGACTAGTTCCGATGGCGAGTCTTTCCAAGTTGAGGAAGTGGTGGCACGAAAACTGCAGATCGTAAAGCACCTGCTCGAAGACGACTGTGTTATTAACGAAATCCCTCTTCAAAACGTTACAGGAAATATTCTCTCCATCGTTCTCGAGTATTGCAAGAAACACGTCGACGATGTGGTCGATGATGATGCATCTGAGGAGCCGAAGAAGAAGAAGCCCGATGATgtggcgggccggttcctgaatcaactgaagaaggagatgatgcatctgagGAGGCGAAGCAGAATCTCGATGCTTGGGACGCAGAGTTCATGAAAAATATTGATATGGAAACAATCTTCAAGCTCATTCTCGCTGCTAACTATCTCAACGTCGAAGGTCTTCTTGGTCTCACTTGCCAGACTGTTGCAGATTACATCAAAGATAAGACGCCAGAGGAAGTTCGAGAACTCTTTAATATCGAGAA
TGATTTCA
>ASK16_at2g03190-usp
taaatgttgaaaaagtaagtatcttagaacaaagtacatgtcatcaaattaattatttctaaaacttataaataaaaaaatctcactatattatactatatttaatatttacattgagttgataagagataccaaaaattaaattttgcttttaggtgaaatcctatctataatggttaatatttttaaaatattaaattacaatattagtataacttatataaaatctaatcaatataattttattagcatgtgtgtagtatatgtatgggtcaaatattaaaagaaaatataagagcctaacaattaattatatagtaggattttgttatatttatttttccttactatatttcctaaattaaagatttgacccactctcaactcattataaaaagagagacattatttcatagcttcatcaattttattcaacaatttctctcatttcatttcttccataaaatctctcaaaaatcaacaaaacaacaaaacaaacaATGTCTTCGAACAAGATTGTGTTGACTAGCTCGGATGATGAATCGTTCGAGGTTGAGGAAGCGGTGGCTCGTAAATTGAAGGTCATAGCACACATGATCGATGACGACTGCGCCGATAAAGCAATCCCGCTTGAAAACGTCACCGGAAATATCCTCGCTTTGGTTATCGAGTATTGCAAGAAACACGTACTTGATGATGTTGATGATAGTGATGATTCTACTGAAGCAACAAGCGAAAATGTAAACGAGGAAGCCAAGAACGAGCTCAGGACTTGGGACGCAGAGTTCATGAAAGAATTTGATATGGAAACAGTCATGAAACTCATTCTCGCTGTTAATTATCTCAACGTCCAAGATCTTCTTGGTCTCACTTGCCAGACCGTTGCAGATCACATGAAAGATATGTCGCCAGAGGAAGTTCGAGAACTCTTTAACATTGAGAATGATTACACACCTGAAGAAGAAGACGCGATTCGTAAGGAAAACGCTT
GGGCTTTT
>ASK17_at2g20160-usp
atgacctttttttggtgaaaacaattatttatgacattgtcatagagctaattattttaaaaacttataaatagaaaatctcactatattatacccaaaatgaaaatttatgttaggtgaaactgaatccaatatataaatataacaatatatggttaatatttttttgaatattaagatagcatctataaaatctcatgaatattttttattagcatatgtgtagtatatgggtcaaatattaaaagataagataagagcctaattaattgattaggattttgttatatttacttttgctttctcttcccttatttaggaaaaaaagagaggaaaatatattttatatatatttcctcaattatagatttgacctcactctcaactcattataaaaagagagacttgcatagcctgagactcatcaatttcatataacaatttcttccataagatatctcaaaaatcttgctcttcgttaaaccagcaaaacaaacaaaATGTCTTCGAAGAAGATTGTGTTGACTAGCTCCGATGATGAATGTTTTGAGATTGACGAAGCGGTGGCTCGTAAGATGCAGATGGTAGCGCACATGATCGATGACGATTGCGCCGATAAAGCAATCCGGCTTCAAAACGTCACTGGAAAGATCCTCGCTATCATTATCGAGTATTGCAAGAAACACGTTGATGATGTTGAAGCCAAGAATGAGTTCGTGACTTGGGACGCAGAGTTCGTGAAAAACATTGATATGGATACACTCTTCAAACTCCTTGACGCTGCTGACTATCTCATCGTCATAGGTCTCAAGAATCTCATTGCCCAGGCCATTGCAGATTACACTGCAGATAAGACGGTAAATGAGATTCGAGAACTCTTTAACATCGAGAACGATTACACACCTGAGGAAGAAGAAGAGCTTCGCAAGAAGAACGAATGGGCTTTCAATTAAtaaccctaaagttccgttgtctaagtgttgatctcga
tgttcttt
>ASK18_at1g10230-usp
taatagtttggcccattattccgaatcatttccttgttaattgagtgtattaataaatgttttggactggtttgtaccaaaaaataaaataatgttaagcttagaagattagaagatatacaataaactttccaaatcggcaacaaaacaaagtatttgatattggtttgatgtgtttcacgaccatagaacaagacggtacattatactatatgaatgttggcaaaagacaagtttttatgtttagttacgtttctctgcaaacgaagatattttttagtttgatcggttttctacaaaccggttccaaatcaatatgatcccattttggttttctcttcagaatgttctagaatcagatgagtgggacttgttgagtacagccgtataggttgtttgggctttatgaaatctttaggcccataattctgatccattatatttccttttctcccctacttgtaagggtttattctggattactcatttgccttataacaatggcttcttcttccgaagagattgtgtccgccggcgaatcatcagagatcgaggaagcggttgcgagtctaaccATGTCTTCTAACAAGATTTTGTTGACGAGTTCCGATGGCGAGTCTTTCGAGATCGACGAAGCGGTGGCGCGTAAGTTTCTGATCATAGTGCACATGATGGAGGATAACTGCGCCGGTGAAGCAATTCCGCTTGAAAATGTCACCGGGGATATCCTCTCCAAGATAATCGAGTACGCGAAGATGCACGTCAATGAACCTAGTGAAGAAGACGAAGACGAGGAGGCGAAGAAGAATCTAGACTCGTGGGACGCTAAGTTCATGGAAAAGCTAGATCTGGAGACCATCTTCAAAATCATTCTCGCTGCCAACTACCTAAACTTCGAAGGACTTCTCGGTTTCGCTAGCCAGACGGTTGCTGATTACATCAAGGACAAAACACCAGAGGAAGTACGAGAGATTTTCAACATCGAGAACG
ATTTCACG
>ASK19_at2g03160-usp
attcacgatcgaggaacttgtacaataaccagtaatcttgcgagtttctttttttttccatgaataataataccaaaaaattagatgtttaaggttttgttagattctacataatctaatatgctcttatatcataattaaattaataattaatcccacgtcaaacaaaattagaagattacagaaaatgttataaactttgcatcgaaaaatacaaatcaaggaacaaaaggagtatattagtatattgctaaagaagtttctagaaatatatatatcttccactaaaccctagttaaaataggatttgagtctattttccttatttctttgtgagaaaaggaaacaacatgaaacccaatatctaattgtgaaaaggaaaacacaattgactgaatcttagggttctataaatagactgattcaacaatctctcatcaaaatttctcttcacaaacaattgactcttgtttttcgttcaacacacaaagcaaaaaacaATGTCTTCGAAAAAGATTGTGTTGACAAGCTCCGATGGTGAATCTTTCAAGGTTGAAGAAGTGGTGGCAAGAAAACTGCAGATCGTAGGACACATTATCGAAGACGACTGTGCTACAAACAAAATCCCTATTCCAAACGTTACCGGAGAGATTCTCGCCAAGGTTATCGAGTACTGCAAGAAACACGTTGAAGACGATGATGACGTGGTGGAGACGCATGAATCATCGACGAAAGGAGATAAAACAGTTGAGGAGGCGAAGAAGAAGCCTGATGATGTGGCCGTACCTGAATCAACTGAAGGAGATGATGAAGCTGAGGATAAGAAGGAGAAGCTTAATGAGTGGGATGCAAAGTTCATGAAGGATTTCGATATTAAGACGATCTTCGACATTATTCTGGCTGCTAACTATCTCAACGTCCAAGGTCTTTTTGATCTCTGTAGCAAGACCATTGCAGATTACATAAAAGATATGACGCCAGAGGAAGTTC
GAGAACTC
### last but not least showdb [just look for the ###]
schleppi:/EMBOSS/data/ask # showdb
Displays information on the currently available databases
# Name Type ID Qry All Comment
# ==== ==== == === === =======
qapblast P OK OK OK BLAST swissnew
qapblastall P OK OK OK BLAST swissnew, all fields indexed
qapblastsplit P OK OK OK BLAST swissnew split in 5 files
qapblastsplitexc P OK OK OK BLAST swissnew split in 5 files, not file 02
qapblastsplitinc P OK OK OK BLAST swissnew split in 5 files, only file
02
qapfasta P OK OK OK FASTA file swissnew entries
qapflat P OK OK OK Swissnew flatfiles
qapflatall P OK OK OK Swissnew flatfiles, all fields indexed
qapflatexc P OK OK OK Swissnew flatfiles, no updated sequence file
qapflatinc P OK OK OK Swissnew flatfiles, only updated sequence file
qapir P OK OK OK PIR
qapirall P OK OK OK PIR
qapirinc P OK OK OK PIR
tpir P OK OK OK PIR using NBRF access for 4 files
tsw P OK OK OK Swissprot native format with EMBL CD-ROM index
tswnew P OK OK OK Swissnew as 3 files in native format with EMBL
CD -ROM index
twp P OK OK OK EMBL new in native format with EMBL CD-ROM
index
[###]askn N OK OK OK ASKxx_atxgxxxxx-sp/usp[###]
qanfasta N OK OK OK FASTA file EMBL rodents
qanfastaall N OK OK OK FASTA file EMBL rodents, all fields indexed
qanflat N OK OK OK EMBL flatfiles
qangcg N OK OK OK GCG format EMBL
qangcgall N OK OK OK GCG format EMBL
qangcgexc N OK OK OK GCG format EMBL without prokaryotes
qangcginc N OK OK OK GCG format EMBL only prokaryotes
qapirexc N OK OK OK PIR
qasrs N OK OK - EMBL in local srs installation
qasrsfasta N OK OK - EMBL in local srs installation, fasta format
qasrswww N OK - - Remote SRS web server
qawfasta N OK OK OK FASTA file wormpep entries
tembl N OK OK OK EMBL in native format with EMBL CD-ROM index
tgb N OK - - Genbank IDs
tgenbank N OK OK OK GenBank in native format with EMBL CD-ROM index
schleppi:/EMBOSS/data/ask #
-------------------------------------------------------------------------------------------
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