[bioproj at physics.iisc.ernet.in: ] (fwd)

Uma Maheswari uma at avesthagen.com
Tue Sep 18 09:11:28 UTC 2001


I think u are refering to "indexing the database for EMBOSS"...if u hhave
set of seq.(database) and u want EMBOSS prog. to use that, just index the
database for EMBOSS...The seq. given in the test folder is just a sample
one and u need not update it.

check the application called dbiflat in EMBOSS...

http://www.uk.embnet.org/Software/EMBOSS/Apps/dbiflat.html

hth
uma.

On Tue, 18 Sep 2001, Johann Visagie wrote:

> The following arrived in my personal mailbox for some reason.  I'm not sure
> I'm best qualified to assist this fellow.
>
> -- Johann
>
>
>
> ----- Forwarded message from "Selvarani.P" <bioproj at physics.iisc.ernet.in> -----
>
> > From: "Selvarani.P" <bioproj at physics.iisc.ernet.in>
> > To: johann at egenetics.com
> > Date: Tue, 18 Sep 2001 12:36:38 +0530 (IST)
> >
> >
> > Respected Sir,
> >
> >         It was a great time for us to know about your package EMBOSS. The
> > stage is so set now, that we have installed the software and the software
> > works fine with the test data and now we plan to update the database. But
> > the file formats .seq, .ref, .numbers , .offset, .names couldn't be
> > retrieved by us that were found in the "PIR directory of TEST" and so with
> > other files found in the directories within "TEST". We want the updated
> > copy of these databases. I would be grateful to you if you could arrange
> > the same for me.
> >
> > from Selvarani P.
> >
> >
>
> ----- End forwarded message -----
>

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