EMBOSS 1.12.0

[ableasby at hgmp.mrc.ac.uk]

EMBOSS 1.12.0 contains the following new programs in addition to
the usual load of library mods/fixes/etc.

Distmat: Creates a distance matrix from multiple alignments of nucleotide or
protein sequences. The sequences need to be aligned before running
this program. The quality of the alignment is of paramount importance
in obtaining meaningful information from this analysis.

Charge: Simple sliding window plot of charge vs position in a protein
sequence.

Cai: Codon adaptive index calculation. A measurement of the level of
usage of the 64 codons in a sequence.


Alan