data files
Robert Milius
milius at bscl.msi.umn.edu
Thu Nov 16 00:01:31 UTC 2000
Hi,
I just downloaded and installed the following databases for
use with EMBOSS 1.7.0:
rebase
prints
prosite
transfac
and used rebaseextract, printsextract, prosextract, and tfextract
to extract them for use with EMBOSS.
Everything seems to work, but the databases ended up being extracted
to my original source directory, not my installation point.
The respective programs (eg patmatmotifs) seem to work ok.
I originally did my configure using "--prefix=/usr/local/EMBOSS" and
my make install went without a hitch.
Did I miss setting some environmental variable or something?
I have the following set:
setenv PLPLOT_LIB /usr/local/EMBOSS/share/EMBOSS
setenv EMBOSS_ACDROOT /usr/local/EMBOSS/share/EMBOSS/acd
thanks,
bob
Robert P. Milius, Ph.D. 612-626-2771 (office)
Basic Sciences Computing Laboratory 612-625-4433 (fax)
University of Minnesota Supercomputing Institute milius at msi.umn.edu
for Digital Simulation and Advanced Computation
More information about the EMBOSS
mailing list