[emboss-dev] Questions about MRS and DbFetch - Checked by AntiVir D

[Guy Bottu]

On Wed, Aug 30, 2006 at 09:14:14AM +0100, Mahmut Uludag wrote:
> The following EMBOSS definition for dbfetch Peter gave me last week is
> working fine in my local EMBOSS installation.
> 
> DB urldbfetch [ type: N methodentry: url format: embl
>   url: http://www.ebi.ac.uk/cgi-bin/dbfetch?db=embl&id=%s&style=raw
> ]

But this is not using the method "dbfetch". There really seems to be a 
problem with it. I myself was already some time using the following :

DB EBI_EMBL [ type: N methodquery: external format: embl 
              app: '/opt/sw/EBIWS/WSDbfetchClient.pl fetchData embl:%s'
]

where WSDbfetchClient.pl is the Perl SOAP client distributed by the EBI
(http://www.ebi.ac.uk/Tools/webservices/WSDbfetch.html).

	regards,
	Guy Bottu