Transeq

Mick Watson michaelwatson at paradigm-therapeutics.co.uk
Tue Jun 18 14:59:43 UTC 2002


Hi

Can anyone tell me why when I give transeq a fasta file like:

>gnl|UG|Hs#S3220135
ATGGCAGCGCGCCCGCTGCCCGTGTCCCCCGCCCGCGCCCTCCTGCTCGCCCTGGCCGGTGCTCTGCTCGCGCCCTGCGA

I get the output

>Hs#S3220135_1
MAARPLPVSPARALLLALAGALLAPCEARGVSLWNEGRADEVVSASVRSGDLWIPVKSFD

Where has the "gnl|UG|" part of my description line gone???!!!  And
why?  Can I switch this "feature" off?

Thanks
Mick






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