[DAS2] Re: Apollo and DAS/2 priorities

[Andrew Dalke]

Allen
> The XML is now as you requested, please confirm.

Missing the namespace declaration.  You have


<SOURCES
       xmlns:xlink="http://www.w3.org/1999/xlink"
       xml:base="http://das.biopackages.net/das/genome/">

should be

<SOURCES
       xmlns="http://www.biodas.org/ns/das/genome/2.00"
       xmlns:xlink="http://www.w3.org/1999/xlink"
       xml:base="http://das.biopackages.net/das/genome/">

The <PROP> element goes after the CATEGORY.  (Which I want to
rename back to CAPABILITY.)

The ASSEMBLY element no longer exists.

Fixing those by hand,

* file:///Users/dalke/cvses/das/das2/scratch/allen_sources.xml:7:84: 
error: attribute "writeable" not allowed at this point; ignored
* file:///Users/dalke/cvses/das/das2/scratch/allen_sources.xml:7:84: 
error: attribute "taxon" not allowed at this point; ignored

There is no more 'writeable' (that's, IMO) something to be decided
as part of the writeback spec.  It might be that we have a

<CAPABILITY type="writeback" />

and the existence of that indicate writeability.

It's also "taxid" and not "taxon".  I used "taxid" because that's
what NCBI uses for their data.

> There are probably also some other Content-Type headers that need to be
> changed for the other responses -- let me know if you spot them.

Haven't gotten that far yet.

					Andrew
					dalke at dalkescientific.com