[DAS2] das2 reference server

[Andrew Dalke]

Here's the experimental reference server I've been working on.
    http://cgi.biodas.org:8081/seq/?format=html

The entries for

# fly_42

     * 2L (22407834 bases):
     * 2R (20766785 bases):
     * 3L (23771897 bases):
     * 3R (27905053 bases):
     * 4 (1281640 bases):
     * X (22224390 bases):

# fly_43

     * 2L (22407834 bases):
     * 2R (20766785 bases):
     * 3L (23771897 bases):
     * 3R (27905053 bases):
     * 4 (1281640 bases):
     * X (22224390 bases):

# worm_160

     * I (15072418 bases):
     * II (15279314 bases):
     * III (13783677 bases):
     * IV (17493785 bases):
     * V (20919396 bases):
     * X (17718851 bases):
     * Mit (13794 bases):

# worm_161

     * I (15072418 bases):
     * II (15279314 bases):
     * III (13783677 bases):
     * IV (17493785 bases):
     * V (20919396 bases):
     * X (17718851 bases):
     * Mit (13794 bases):

# worm_162

     * I (15072418 bases):
     * II (15279314 bases):
     * III (13783677 bases):
     * IV (17493785 bases):
     * V (20919396 bases):
     * X (17718851 bases):
     * Mit (13794 bases):

should be real.  The others are part of my test set.

It even validates.  Amazing that.

One thing - I've created a new document type which
lists all of the "segments" documents available from the
reference server.

(nomenclature: I'm using "assembly" to mean "a collection
of segments".  I know, it isn't really an assembly.  I'm
using it for now because I didn't like using
   "segment", "segments", "segments_list"
instead using
   "segment", "assembly", "assemblies"

Ideas on a better name?
)

This should be a sources document instead.  Haven't
gotten there yet.


					Andrew
					dalke at dalkescientific.com