[DAS2] ensembl & stylesheet

Andreas Prlic ap3 at sanger.ac.uk
Tue Nov 22 17:58:08 UTC 2005


Hi!

another question yesterday was about ensembl & stylesheet support.

an example das source that provides a stylesheet is the following:

http://das.ensembl.org/das/ens_35_segdup_washu/stylesheet

description about it is at:
http://das.ensembl.org/das/ens_35_segdup_washu/

To show how it is rendered in ensembl follow this "auto-activation"  
link:

http://www.ensembl.org/Homo_sapiens/contigview?conf_script=contigview; 
c=17:14149999.5:1;w=200000;h=; 
add_das_source=(name=SEGDUP_WASHU+url=http://das.ensembl.org/ 
das+dsn=ens_35_segdup_washu+type=ensembl_location+color=black+strand=r+l 
abelflag=U+stylesheet=Y+group=Y+depth=9999+score=N+active=1)


In terms of source code ensembl uses the Bio::DASLite perl module for  
fetching features and stylesheets
http://search.cpan.org/~rpettett/Bio-DasLite-0.10/

Hope this helps,
Cheers,
Andreas

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Andreas Prlic      Wellcome Trust Sanger Institute
                               Hinxton, Cambridge CB10 1SA, UK
			 +44 (0) 1223 49 6891




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