[DAS2] Sequence retrieval proposal
nomi at fruitfly.org
Thu Dec 8 19:13:05 UTC 2005
On 8 December 2005, Thomas Down wrote:
> > There's already a huge number of existing sequence file formats.
> > What would another provide? Are some of them already extensible?
> > Several of those formats are designed and developed by people involved
> > with DAS. If it's important, extend GAME or GFF.
> Do GAME or GFF have a sequence representation? I thought they were
> both primarily feature-table formats
GAME certainly has a sequence representation, and i think GFF3 must,
though old GFF doesn't.
<seq id="3R:1178000-1230000" length="52001" focus="true">
> (right now I'm having trouble
> finding the GAME documentation though...).
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