[DAS] RELAX NG schema for "sequence" command

Andrew Roberts aroberts at broadinstitute.org
Mon Feb 28 18:34:10 UTC 2011


Hello,

	I'm working on some validations, and I think I may have found an  
error in sequence.rng (www.dasregistry.org/validation1.6/ 
sequence.rng).  It appears that this schema makes no provision for the  
actual text data that belongs to the sequence element (i.e. the bases  
themselves).  Is this a known issue?

	If not, I think the solution is to add a <text/> element inside the  
sequence element.  Line 10 should read,

                 <attribute name="start"><data type="integer"></data></ 
attribute><attribute name="stop"><data type="integer"></data></ 
attribute><optional><attribute name="version"><text></text></ 
attribute></optional><optional><attribute name="label"><text></text></ 
attribute></optional><text/></element>

Cheers,

Andrew



More information about the DAS mailing list