[DAS] 1.53E validation errors

Jonathan Warren jw12 at sanger.ac.uk
Wed Sep 1 14:04:18 UTC 2010


actually caching headers not appearing due to restructuring of some of  
the web pages - thanks for the heads up.

On 27 Aug 2010, at 15:07, Dave Messina wrote:

> Hi everybody,
>
> After receiving an automated notice that my DAS 1.53E servers are  
> scheduled for deletion, I'm trying to bring them into compliance.  
> I'm not sure exactly how to fix the validation issues, though, so  
> I'm here to ask for help.
>
>
> 1. sources
>
> When validating my server, the DAS registry reports this error:
>
> capability is stated for this server but is not valid or  
> provided.validating http://das.sbc.su.se:9000//das/sources  
> RegReportErrorHandler.Error Line Number:4 column number:467  
> attribute "type" has a bad value. Possible values are:  
> das1:alignment,das1:component,das1:cors,das1:dna,das1:entry_points,das1:error-segment,das1:feature-by-id,das1:features,das1:interaction,das1:maxbins,das1:sequence,das1:sources,das1:structure,das1:stylesheet,das1:supercomponent,das1:types,das1:unknown-feature,das1:unknown-segment
>
>
> My DAS server does provide a sources response, including capabilities:
>
> 	http://das.sbc.su.se:9000//das/sources
>
> But I'm not sure why it's invalid.
>
> The capability types my server returns are:
>
> das1:dsn
> das1:features
> das1:stylesheet
>
> das1:dsn isn't in the list possible values; is it no longer valid?
>
> Otherwise, I wonder if this is because I'm running an ancient  
> version of ProServer (v463).
>
>
>
> 2. stylesheet
>
> When validating, the registry reports this error:
>
> capability was stated for this server but is either not present or  
> valid.validating http://das.sbc.su.se:9000//das/hmmtop/stylesheet  
> RegReportErrorHandler.Error Line Number:9 column number:17 tag name  
> "FONT" is not allowed. Possible tag names are:  
> <BGCOLOR>,<BUMP>,<HEIGHT>,<LABEL>,<LINEWIDTH>  
> RegReportErrorHandler.Error Line Number:18 column number:17 tag name  
> "FONT" is not allowed. Possible tag names are:  
> <BGCOLOR>,<BUMP>,<HEIGHT>,<LABEL>,<LINEWIDTH>  
> RegReportErrorHandler.Error Line Number:27 column number:17 tag name  
> "FONT" is not allowed. Possible tag names are:  
> <BGCOLOR>,<BUMP>,<HEIGHT>,<LABEL>,<LINEWIDTH> the document is NOT  
> valid.
>
>
> I've removed that tag from the stylesheet and verified that my  
> server is no longer presenting it:
>
> 	http://das.sbc.su.se:9000/das1/hmmtop/stylesheet
>
> However, when I try to revalidate, the registry reports the same  
> error.
>
> Is there perhaps caching going on?
>
>
>
>
> Thanks for any suggestions,
> Dave
>
>
>
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> DAS at lists.open-bio.org
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Jonathan Warren
Senior Developer and DAS coordinator
blog: http://biodasman.wordpress.com/
jw12 at sanger.ac.uk
Ext: 2314
Telephone: 01223 492314









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