[DAS] links
Alex Lam
alex.lam at cimr.cam.ac.uk
Thu Sep 4 08:24:15 EDT 2003
Hi Jonathan,
This is the way I link my DAS features to external website. If you go to
the conf directory of your ensembl installation, there is a file called
Homo_sapiens.ini (or something else if you are dealing with another
species). In this file there is a DAS CONFIG section like this:
#############
# DAS CONFIG
#############
das_TIGR1 = 1
[das_TIGR1]
dsn = dasview_human_mixedspeciesTC
url = http://www.tigr.org/docs/tigr-scripts/nhgi_scripts/das
label = TIGR multi spp. alignments
caption = TIGR Mixed TC
col = red
linktext = More Info...
linkURL = DAS_HSTIGR
strand = b
depth = 6
group = 1
on = on
DAS_HSTIGR =
http://www.tigr.org/docs/tigr-scripts/nhgi_scripts/tc_report.pl?species=human;tc=###ID###
Good luck,
Alex
On Wed, 2003-09-03 at 23:37, Warren, Jonathan wrote:
> Hi
>
> Can someone give me some tips on how to add links to my das features
> displayed in ensembl via dazzle?
> How do I add the links to the gff type table that is in the "setting up
> an ensembl das server" pdf document?
>
> Thanks
>
> Jonathan.
>
>
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--
----
Alex C. Lam
Computer Associate
JDRF/WT Diabetes and Inflammation Laboratory
Cambridge Institute for Medical Research
Wellcome Trust/MRC Building
University of Cambridge
Hills Road, Cambridge, CB2 2XY
Great Britain
Office: 01223 763229
Web: http://www-gene.cimr.cam.ac.uk/todd/
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