[DAS] Possible XML error with LDAS 1.08

Lincoln Stein lstein@cshl.org
Fri, 1 Nov 2002 10:49:16 -0500


Sorry about that.  This should be fixed in the version I uploaded yesterday.

Lincoln

On Monday 28 October 2002 05:59 pm, Gosink, Mark (SEA) wrote:
> Hello all,
> 	I'm getting an error with the output from the LDAS version 1.08 when
> I run the test URL:
>
> http://my.web.address/cgi-bin/das/dicty/features?segment=Cont_1a;type=RNAi
>
> 	Below is the output generated. Notice the "<GROUP
> id="RNAi:exper1"RNAi />".  For some reason the XML doesn't appear to be
> forming correctly. It happens with some of the other test urls as well. Is
> this a bug or am I missing something? Does this happen with the earlier
> versions?
> Thanks,
> Mark
>
> <?xml version="1.0" standalone="yes"?>
> <!DOCTYPE DASGFF SYSTEM "http://www.biodas.org/dtd/dasgff.dtd">
> <DASGFF>
> <GFF version="1.01"
> href="http://my.web.address/cgi-bin/das/dicty/features?segment=Cont_1a;type
>= RNAi">
> <SEGMENT id="Cont_1a" start="1" stop="5000" version="1.0">
>    <FEATURE id="RNAi:exper1/31" label="exper1">
>       <TYPE id="RNAi" category="experimental">RNAi</TYPE>
>       <METHOD id="RNAi">RNAi</METHOD>
>       <START>1</START>
>       <END>2500</END>
>       <SCORE>-</SCORE>
>       <ORIENTATION>+</ORIENTATION>
>       <PHASE>0</PHASE>
>       <GROUP id="RNAi:exper1"RNAi />
>    </FEATURE>
> </SEGMENT>
> </GFF>
> </DASGFF>
>
>
>
> The information contained in this email is intended for the
> personal and confidential use of the addressee only.  It may
> also be privileged information.  If you are not the intended
> recipient then you are hereby notified that you have received
> this document in error and that any review, distribution or
> copying of this document is strictly prohibited.  If you have
> received this communication in error, please notify Celltech
> immediately on:
>
> +44 (0)1753 534655, or email "is@celltech.co.uk"
>
> _______________________________________________
> DAS mailing list
> DAS@biodas.org
> http://biodas.org/mailman/listinfo/das

-- 
========================================================================
Lincoln D. Stein                           Cold Spring Harbor Laboratory
lstein@cshl.org			                  Cold Spring Harbor, NY
========================================================================