[DAS] gaps in Ensembl
Fri, 4 Jan 2002 10:10:13 -0500
DAS doesn't care whether the underlying DNA contains nucleotides or N's. It
only cares about coordinates. So if you have something that you know spans
an unsequenced area, such as a pair of BAC ends, DAS will work just fine.
On Thursday 03 January 2002 13:06, Ewan Birney wrote:
> On Thu, 3 Jan 2002, Simon Chan wrote:
> > Hi Everyone,
> > I know that Ensembl sticks "N"s in the gaps (unsequenced data). What
> > happens if the data we overlay spans a region which contains
> > unsequenced and sequenced data?
> Nothing, but i've got to question why you might want to do that...
> > Many thanks for your time, Everyone!
> > Warmest Regards,
> > Simon Chan
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