[BioSQL-l] State of BioSql?

Peter Cock p.j.a.cock at googlemail.com
Wed Sep 19 07:37:48 UTC 2012


On Wed, Sep 19, 2012 at 7:06 AM, Hilmar Lapp <hlapp at drycafe.net> wrote:
> Is it documented somewhere what needs to be fixed for those scripts to
> support SQLite, or is it just a matter of testing?
>
> -hilmar

>From memory, they have code to talk to MySQL, PostgreSQL, etc,
but need a bit of plumbing to talk to SQLite too - where you don't
need a username/password and the database name is just a
filename. I don't recall any nasty surprises in their SQL
implementation.

(And some similar work is needed on the BioPerl-DB side.)

Peter



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