[BioSQL-l] PhyloDB

Hilmar Lapp hlapp at drycafe.net
Wed Sep 19 06:20:24 UTC 2012


MJ,

Apologies for the long time your message was held up in moderation. Was your question resolved meanwhile? There is a script that comes with Biosql that loads the ITIS taxonomy (which essentially consists of 5 trees, one for each "kingdom") into the PhyloDB tables. This may serve as an example for how to get data into those tables. Does this answer your question?

-hilmar

Sent with a tap.

On Jul 8, 2012, at 9:06 PM, Mo_Jun_Shen at bd.com wrote:

> Dear  Sir/Madam, 
> 
> I am very interested in PhyloDB in BioSQL for querying taxonomy.  However, I couldn't find scripts or document to describe how to setup data for phyloDB after initiating phyloDB .  Could you please provide guidance?
> 
> Thank you. 
> 
> Best Regards, 
> MJ Shen
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