[BioSQL-l] Web front-ends to BioSQL

[Chris Fields]

On Jan 29, 2009, at 11:44 AM, James Procter wrote:

>
> Chris Fields wrote:
>> Gbrowse, maybe?  There is a BioSQL plugin for it  
>> (Bio::DB::Das::BioSQL):
>>
>> http://gmod.org/wiki/GBrowse#About_Databases
> I'm also in the market for a quick and easy front end - from what I've
> heard from a colleague, GBrowse can be tricky to install. Also - for  
> my
> application we'd like to easily gather sets of proteins and then  
> explore
> their annotation. This is a little out of the scope of GBrowse.

I don't find Gbrowse itself tricky as much as getting BioPerl  
installed.  One can use Gbrowse for what you want but there are  
probably better resources (Ensembl, maybe).

chris

> I think there might be a niche needing filling here - would anyone be
> interested in pooling code/resources ?
>
> Jim.
>
> -- 
> -------------------------------------------------------------------
> J. B. Procter  (ENFIN/VAMSAS)  Barton Bioinformatics Research Group
> Phone/Fax:+44(0)1382 388734/345764  http://www.compbio.dundee.ac.uk
> The University of Dundee is a Scottish Registered Charity, No.  
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