[BioSQL-l] bioseqDB error

[Hilmar Lapp]

Is this upon loading into a fresh database, or updating an existing  
one (into which the NCBI taxonomy had been loaded before)?

If it is the first, could you try this again with a fresh download  
from NCBI? The most recent update, which dates from 7.20pm this  
evening only has a single row for this taxon (which is Mus musculus,  
BTW), and maybe the one you happened to grab had an error.

	-hilmar

On Jan 25, 2008, at 6:49 PM, snoze pa wrote:

> Hi Anyone know why i am getting this error message!!
>
> Loading NCBI taxon database in taxdata:
>         ... retrieving all taxon nodes in the database
>         ... reading in taxon nodes from nodes.dmp
>         ... insert / update / delete taxon nodes
> failed to insert node (10090;10090;10088;species;1;2): Duplicate entry
> '10090' for key 2 at load_ncbi_taxonomy.pl line 568
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-- 
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: Hilmar Lapp  -:-  Durham, NC  -:-  hlapp at gmx dot net :
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