[BioSQL-l] Passwords on biosql databases

Hilmar Lapp hlapp at gmx.net
Thu Dec 4 18:43:17 UTC 2008


On Dec 4, 2008, at 12:16 PM, Peter wrote:

> From a quick look at the BioPerl code for load_seqdatabase.pl, my
> guess is you need to use "pass" as the argument name, e.g.
>
> my $db = Bio::DB::BioDB->new(-database   => "biosql",
>                             -printerror => $printerror,
>                             -host       => $host,
>                             -port       => $port,
>                             -dbname     => $dbname,
>                             -driver     => $driver,
>                             -user       => $dbuser,
>                             -pass       => $dbpass,
>                             -dsn        => $dsn,
>                             -schema     => $schema,
>                             -initrc     => $initrc,
>                             );


Yes, and the same is true if you are using Bio::DB::BioDB directly.  
B::D::BioDB::new() accepts the options documented there, plus (as  
noted there, actually), all options accepted by  
Bio::DB::SimpleDBContext.

	-hilmar
-- 
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: Hilmar Lapp  -:-  Durham, NC  -:-  hlapp at gmx dot net :
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