[BioSQL-l] Uploading data to biosql dbs

Angshu Kar angshu96 at gmail.com
Thu Dec 8 11:00:48 EST 2005


Hi,

I've created 5 tables (taxon, taxon name, bioentry, biosequence,
biodatabase) in my postgresql database (linux box) using the biosql schema
ddl from
http://cvs.open-bio.org/cgi-bin/viewcvs/viewcvs.cgi/biosql-schema/sql/biosqldb-pg.sql?rev=1.29&cvsroot=biosql&content-type=text/vnd.viewcvs-markup
 .
Now I want to load the tables with arabidopsis data (say from tigr db).
Could you please let me know where can I find such scripts for pgsql? And
also I find at http://bio.perl.org/Core/Latest/index.shtml  that the DB
module has not been updated since 2001. Do I need to install that? Or are
there some new releases?

I'll be obliged if you can guide.

Thanks,
Angshu



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