[BioSQL-l] PersistentObjects

Hilmar Lapp hlapp at gnf.org
Mon May 12 19:14:16 EDT 2003


> 
> And is there any demo on seq feature or ontology?

Look at the tests in t/, specifically t/seqfeature.t and t/ontology.t.
The ontology tests parse, upload, re-retrieve, and query a whole
ontology, namely SOFA. The test also generates the transitive closure
table and queries it, so it shows you how to do that.

	-hilmar

> 
> Thanks a lot.
> 
> Juguang
> 
> ------------ATGCCGAGCTTNNNNCT--------------
> Juguang Xiao
> Temasek Life Sciences Laboratory, National University of 
> Singapore 1 Research Link,  Singapore 117604 juguang at tll.org.sg
> 
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