[BioSQL-l] Troubles with load_seqdatabase.pl

Hilmar Lapp hlapp at gnf.org
Wed Dec 3 20:10:45 EST 2003


This sounds like a bioperl version mismatch problem. Which version of
bioperl are you running? You'll need at least 1.2.3 installed.

	-hilmar

> -----Original Message-----
> From: Esther Kabore [mailto:ekabore at irisa.fr] 
> Sent: Wednesday, December 03, 2003 5:05 AM
> To: biosql-l at portal.open-bio.org
> Subject: [BioSQL-l] Troubles with load_seqdatabase.pl
> 
> 
> 
> Hi,
> when trying to load data in my PostgreS database through 
> load-seqdatabase.pl, I get this error message:
> 
> Can't locate object method "category" via package 
> "Bio::Annotation::OntologyTerm" at 
> /local/lib/perl5/site_perl/5.8.0/Bio/DB/Persistent/PersistentO
> bject.pm line 488, <GEN0> line 1015.
> 
> I use --lookup and --safe options.
> Thank you for helping me.
> Esther
> 
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