[BioRuby] Vienna_RNA

[Naohisa GOTO]

Hi,

> rinruby.rb:766:in `find_R_on_windows': Cannot locate R executable (RuntimeError)

I don't know much about the vienna_rna gem, but
download and install R for Windows may solve the problem.
http://mirrors.ebi.ac.uk/CRAN/
(or any mirror site of http://www.r-project.org/ )

Naohisa Goto
ng at bioruby.org

On Mon, 13 Oct 2014 09:58:30 +0000
McCreavy David <David.McCreavy at lhch.nhs.uk> wrote:

> Hi Guys,
> 
> Is there a way to use Vienna_RNA through Bio Ruby.
> 
> I've tried using the ViennaRNA gem on a Win7 pc but experience the following error;
> 
> rinruby.rb:766:in `find_R_on_windows': Cannot locate R executable (RuntimeError)
> 
> The VR files are installed locally and work correctly from the command line.
> 
> Kind Regards, David
> 
> David McCreavy
> PACS/RIS Manager
> Radiology Department
> Direct Line 0151 600 1705 | Mobile 0788 7362868
> Liverpool Heart & Chest Hospital NHS Foundation Trust
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