[BioRuby] Xcode 5.1 and Biogems

[Raoul Bonnal]

I will dig into it this week

thanks for spotting it.

On Apr 27, 2014, at 8:12 PM, Joachim Baran <joachim.baran at gmail.com> wrote:

> Hello,
> 
>  I think the deployed gem on Rubygems needs synching with the development
> repo. I cannot fix the bugs that I discovered based on the state of what I
> get when installing BioRuby gems & co from Rubygems.
> 
> Kim
> 
> 
> On 17 April 2014 11:02, Joachim Baran <joachim.baran at gmail.com> wrote:
> 
>> Hi!
>> 
>>  Travis config and Gemfile in Raoul's repo look nothing like what I get
>> when creating a fresh biogem.
>> 
>>  I think there's synchronization issue here. Is development that far
>> ahead from the deployed code base?
>> 
>> Kim
>> 
>> 
>> On 16 April 2014 21:51, Pjotr Prins <pjotr.public14 at thebird.nl> wrote:
>> 
>>> I would clone Raoul's version.
>>> 
>>> On Tue, Apr 15, 2014 at 09:28:26PM -0700, Joachim Baran wrote:
>>>> Hello,
>>>> 
>>>>  I would update the biogems.info instructions myself, but I do not
>>> know
>>>> where I should do that.
>>>> 
>>>>  Mac OS X users with Xcode 5.1 and newer need to install 'bio-gem' like
>>>> this:
>>>> 
>>>>  sudo
>>>> ARCHFLAGS=-Wno-error=unused-command-line-argument-hard-error-in-future
>>> gem
>>>> install bio-gem
>>>> 
>>>>  That is related to command line options that are obsolete with the
>>> newest
>>>> clang.
>>>> 
>>>> Joachim
>>>> _______________________________________________
>>>> BioRuby Project - http://www.bioruby.org/
>>>> BioRuby mailing list
>>>> BioRuby at lists.open-bio.org
>>>> http://lists.open-bio.org/mailman/listinfo/bioruby
>>>> 
>>> 
>> 
>> 
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