[BioRuby] Developing a VISION

Pjotr Prins pjotr.public14 at thebird.nl
Mon Feb 27 10:33:27 UTC 2012


Excellent idea.

On Mon, Feb 27, 2012 at 11:19:26AM +0100, Raoul Bonnal wrote:
> Cool Pjotr, I could add this feature/tempalte to biogem I'll open an
> issue/request 
> 
> 
> On 27/02/12 10.55, "Pjotr Prins" <pjotr.public14 at thebird.nl> wrote:
> 
> > Continuous integration testing is very useful for biogems/plugins. The
> > Ruby community has come up with travis-ci, which is integrated into
> > github! Any time code is submitted to github, the automated testing on
> > different platforms kicks in.
> > 
> > Here we set out to set up travis-ci with a biogem. I chose my bio-gff3
> > gem for integrated testing. See
> > 
> >   https://github.com/pjotrp/bioruby-gem/blob/master/doc/integration-testing.md
> > 
> > On Sat, Feb 25, 2012 at 10:16:21AM +0100, Raoul Bonnal wrote:
> >> +1
> >> 
> >> 
> >> On 25/02/12 09.42, "Pjotr Prins" <pjotr.public14 at thebird.nl> wrote:
> >> 
> >>> ## Vision statement: BioRuby is agile
> >>> 
> >>> The Ruby community is always working on agile processes. BioRuby can
> >>> benefit from behaviour driven development (BDD), specifications,
> >>> doctests and integration and unit testing.
> >>> 
> >>> Realisation: 
> >>> 
> >>> In addition to unit testing we should concentrate on introducing
> >>> Rspec, Cucumber, rubydoctests across the board. Also we should use the
> >>> continuous integration testing by services such as travis-ci (I have a
> >>> writeup on the latter soon) and perhaps use the OBF test services for
> >>> stable plugins.
> >> 
> >> 
> 
> 



More information about the BioRuby mailing list