[BioRuby] A class for GEO

[Naohisa GOTO]

Hi Kazuhiro,

The GEO support was first proposed in September 2008, but it was
pending because of some matters, and no one wanted to work to merge.

In this February, we agreed to include it, or to create a plug-in
package.

It would be great if you or someone can work to do so.

Naohisa Goto
ngoto at gen-info.osaka-u.ac.jp / ng at bioruby.org


On Thu, 6 May 2010 15:50:22 +0900
Kazuhiro Hayashi <k.hayashi.info at gmail.com> wrote:

> Hi,
> 
> I'd like to process GEO files with Ruby.
> Are there any classes for GEO in BioRuby?
> 
> I found the related files in this repository.
> http://github.com/search?q=bioruby+geo&type=Everything&repo=&langOverride=&start_value=1
> http://github.com/pjotrp/bioruby/tree/cd65f5b94d47990917226a569b431fef822c1585/lib/bio/db/microarray
> 
> However, I was not able to find the files in the latest version of BioRuby.
> http://github.com/bioruby/bioruby/
> 
> best regards.
> 
> Kazuhiro Hayashi
> 
> -- 
> Kazuhiro Hayashi
> Department of Computational Biology,  The University of Tokyo
> email: k_hayashi at cb.k.u-tokyo.ac.jp
> tel: 04-7136-3988
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