[BioRuby] Workflows and Parallelization

Raoul Bonnal bonnalraoul at ingm.it
Thu Dec 23 09:47:47 UTC 2010

Hi Hiro, 

On 23/dic/2010, at 02.11, MISHIMA, Hiroyuki wrote:
> Unfortunately I have not had experience in analyzing transcriptome using
> NGS. Recently I am working on exome mutation analysis and micro RNA
> analysis using NGS. I will let you know if I find good material for NGS
> + transcriptome analysis.
Actually the focus of my institute is mainly on mirna, so I'm also interested on techniques for analyzing NGS(illumina) and microRNA.


> By the way, I afraid that talking about Rake/Pwrake and workflow
> automation in the BioRuby mailing list may be kind of out-of-focus. Is it OK?
Don't be afraid, was just a matter of topic (subject) :-)
During the irc meeting they talked about workflows, so this is the right place


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