[BioRuby] newick gsub(' ','_')

Ben Woodcroft donttrustben at gmail.com
Mon Jul 20 03:52:09 UTC 2009


I'm attempting to put spaces in the leaf nodes of a phylogenetic tree, and
the bioruby newick writer is replacing them with underscores - not my
desired behaviour.

I believe the gsub I'm talking about is on line 58 of

If a leaf node name has spaces in it, should it then be surrounded with a
single quote? Am I not understanding something about the newick format?

Thanks in advance,

FYI: My email addresses at unimelb, uq and gmail all redirect to the same

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