[BioRuby] bio blast

Mitsuteru Nakao n at bioruby.org
Wed Jan 30 16:28:52 UTC 2008


If you remove the options "-m 0", you may get the search result
without the error.
# Because I don't have Windows.:-(

> factory = Bio::Blast.new("blastp","#{db}","", "local")

And thank you for your bug report.
this is a bug in the Bio::Blast::Report class.

> factory = Bio::Blast.new("blastp","#{db}","-m  0", "local")


Mitsuteru Nakao, Ph.D.
n at bioruby.org / mn at kazusa.or.jp

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