[BioRuby] soap functional test fails

Toshiaki Katayama ktym at hgc.jp
Tue May 9 18:46:21 UTC 2006


Hi Jan,

Have you also set the environmental variable 'soap_use_proxy'?
I think Ruby's SOAP library checks its value in addition to the HTTP_PROXY.
Please see the RDoc documentation in bio/io/soapwsdl.rb file.

Toshiaki

On 2006/05/09, at 19:42, jan aerts (RI) wrote:

> Hi all,
>
> The functional test soap_wsdl.rb fails here. Probably has something to
> do with our proxy. The environment variable HTTP_PROXY is set correctly.
>
> my_server>ruby ./test_soapwsdl.rb
> Loaded suite ./test_soapwsdl
> Started
> /usr/lib/ruby/1.8/timeout.rb:43:in `new': execution expired
> (Timeout::Error)
>         from /usr/lib/ruby/1.8/net/protocol.rb:83:in `connect'
>         from /usr/lib/ruby/1.8/net/protocol.rb:82:in `timeout'
>         from /usr/lib/ruby/1.8/timeout.rb:62:in `timeout'
>         from /usr/lib/ruby/1.8/net/protocol.rb:82:in `connect'
>         from /usr/lib/ruby/1.8/net/protocol.rb:64:in `initialize'
>         from /usr/lib/ruby/1.8/net/http.rb:429:in `do_start'
>         from /usr/lib/ruby/1.8/net/http.rb:418:in `start'
>         from /usr/lib/ruby/1.8/soap/netHttpClient.rb:115:in `start'
>          ... 20 levels...
>         from /usr/lib/ruby/1.8/test/unit/autorunner.rb:200:in `run'
>         from /usr/lib/ruby/1.8/test/unit/autorunner.rb:13:in `run'
>         from /usr/lib/ruby/1.8/test/unit.rb:285
>         from /usr/lib/ruby/1.8/test/unit.rb:283
>
> Many thanks,
>
> Jan Aerts, PhD
> Bioinformatics Group
> Roslin Institute
> Roslin, Scotland, UK
> +44 131 527 4200
>
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