[BioRuby] combination bioruby and rails

Moses M. Hohman mmhohman at northwestern.edu
Tue May 9 19:24:47 UTC 2006

So, I actually, for fun, took a look at this a couple months ago. I  
dropped it because I wasn't sure how well-maintained/in-use BioSQL  
was. Is it something actively used? If so, I'd be happy to help with  


On May 9, 2006, at 1:22 PM, jan aerts (RI) wrote:

> Hi all,
> Has anyone tried to integrate bioruby with rails? I noticed that  
> there's a rails module in bio/shell, but couldn't get it working.
> How straightforward would it be to implement a BioSQL-based  
> database with a rails interface? A feature of the web-interface  
> could then be that sequences would be displayed graphically (with  
> features annotated; using SVG?), and that the user could run remote  
> BLASTs right from within the sequence viewer... or something.
> Anyone know of any bioruby/rails implementations?
> jan.
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