[BioRuby] moving to Ruby 1.8?

Moses Hohman mmhohman at northwestern.edu
Mon Nov 15 17:07:36 EST 2004


Also, on the OS X/Ruby 1.8 question, I think that if the older releases 
are still available, then we shouldn't wait, because in fact it is 
pretty easy to install Ruby 1.8 on OS X. But that is just my 
perspective. I admit I'm very comfortable with the whole ./configure, 
make, make install thing, and others may not be as comfortable. 
However, "configure/make/sudo make install" does run very smoothly, on 
10.3 at least.

Moses

On Nov 14, 2004, at 11:56 PM, Toshiaki Katayama wrote:

> On 2004/11/15, at 10:52, Moses Hohman wrote:
>> This sounds good. So, for now, don't check anything into lib that 
>> doesn't work with Ruby 1.6? And at some point in the future, once the 
>> final 0.6.* release has gone out, we'll check things in to lib that 
>> move toward 1.8.1, is that right? How many more 0.6.* releases are 
>> planned?
>
> Right.
>
> It depends on when we move to >=1.8.1, however, not so many
> 0.6 releases are planed (one or zero, maybe).
>
> e.g. Should we wait for OS X shipped with Ruby 1.8 series?
>
>> Or do we want to use branches in CVS to accomplish this?
>
> This will be the right way to go.
> The problem is, to be honest, I'm not so familiar with
> the CVS branching.
>
> Toshiaki
>
>
>
>> Moses
>>
>> On Nov 14, 2004, at 9:13 AM, Toshiaki Katayama wrote:
>>
>>> Hi Moses,
>>>
>>> Thank you for your contributions.
>>>
>>> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
>>> To ALL:
>>> Unit tests are now merged in the CVS tree and can be run
>>> with 'ruby install.rb test'.
>>> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
>>>
>>> I think BioRuby still compatible with Ruby 1.6.8.
>>>
>>> How about to keep BioRuby 0.6 series with support for Ruby 1.6,
>>> and preparing 0.7 series which may require >=1.8.1?
>>>
>>> I'm fine even if the unit tests fails with Ruby 1.6 during the
>>> above transition, as far as the BioRuby library can be installed
>>> and used with Ruby 1.6.
>>>
>>> Thanks,
>>> Toshiaki Katayama
>>>
>>> On 2004/11/14, at 3:13, Moses Hohman wrote:
>>>
>>>> Hi,
>>>>
>>>> What version(s) of Ruby does bioruby officially support? >=1.8.1? 
>>>> Is 1.6 support being phased out? I just want to make sure that 
>>>> stuff I check into CVS (mostly unit tests and maybe some small 
>>>> refactorings) fits the standard and everyone's expectations.
>>>>
>>>> thanks,
>>>>
>>>> Moses
>>>>
>>>> _______________________________________________
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>>>> BioRuby at open-bio.org
>>>> http://portal.open-bio.org/mailman/listinfo/bioruby
>>>
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>>>
>>
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>
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