[BioRuby-cvs] bioruby/lib/bio/db/embl format_embl.rb, 1.1.2.6, 1.1.2.7

Naohisa Goto ngoto at dev.open-bio.org
Thu Jun 19 12:45:18 UTC 2008


Update of /home/repository/bioruby/bioruby/lib/bio/db/embl
In directory dev.open-bio.org:/tmp/cvs-serv596/lib/bio/db/embl

Modified Files:
      Tag: BRANCH-biohackathon2008
	format_embl.rb 
Log Message:
avoid error when keywords or classification is nil


Index: format_embl.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/db/embl/Attic/format_embl.rb,v
retrieving revision 1.1.2.6
retrieving revision 1.1.2.7
diff -C2 -d -r1.1.2.6 -r1.1.2.7
*** format_embl.rb	17 Jun 2008 16:06:04 -0000	1.1.2.6
--- format_embl.rb	19 Jun 2008 12:45:15 -0000	1.1.2.7
***************
*** 166,173 ****
  <%= embl_wrap('DE   ', definition) %>
  XX   
! <%= embl_wrap('KW   ', keywords.join('; ') + '.') %>
  XX   
  OS   <%= species %>
! <%= embl_wrap('OC   ', classification.join('; ') + '.') %>
  XX   
  <% hash = {}; (references || []).each do |ref| %><%= reference_format_embl(ref, hash) %>
--- 166,173 ----
  <%= embl_wrap('DE   ', definition) %>
  XX   
! <%= embl_wrap('KW   ', (keywords || []).join('; ') + '.') %>
  XX   
  OS   <%= species %>
! <%= embl_wrap('OC   ', (classification || []).join('; ') + '.') %>
  XX   
  <% hash = {}; (references || []).each do |ref| %><%= reference_format_embl(ref, hash) %>




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