[BioRuby-cvs] bioruby/lib/bio sequence.rb,0.58.2.1,0.58.2.2

[Naohisa Goto]

Update of /home/repository/bioruby/bioruby/lib/bio
In directory dev.open-bio.org:/tmp/cvs-serv19681/lib/bio

Modified Files:
      Tag: BRANCH-biohackathon2008
	sequence.rb 
Log Message:
* lib/bio/sequence.rb
  * changed to include Format module
* lib/bio/sequence/format.rb
  * fixed bug: incorrect refactoring


Index: sequence.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/sequence.rb,v
retrieving revision 0.58.2.1
retrieving revision 0.58.2.2
diff -C2 -d -r0.58.2.1 -r0.58.2.2
*** sequence.rb	13 Feb 2008 10:28:16 -0000	0.58.2.1
--- sequence.rb	14 Feb 2008 03:13:46 -0000	0.58.2.2
***************
*** 71,74 ****
--- 71,75 ----
    autoload :Generic, 'bio/sequence/generic'
    autoload :Format,  'bio/sequence/format'
+   include Format
  
    # Create a new Bio::Sequence object
***************
*** 149,153 ****
    # *Returns*:: String object
    def output(style)
-     extend Bio::Sequence::Format
      case style
      when :fasta
--- 150,153 ----