[BioRuby-cvs] bioruby/lib/bio/io flatfile.rb,1.60,1.61

[Katayama Toshiaki]

Update of /home/repository/bioruby/bioruby/lib/bio/io
In directory dev.open-bio.org:/tmp/cvs-serv6671/io

Modified Files:
	flatfile.rb 
Log Message:
* the first line of the MEDLINE entry is changed from UI to PMID


Index: flatfile.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/io/flatfile.rb,v
retrieving revision 1.60
retrieving revision 1.61
diff -C2 -d -r1.60 -r1.61
*** flatfile.rb	9 Jul 2007 14:08:34 -0000	1.60
--- flatfile.rb	15 Nov 2007 07:07:16 -0000	1.61
***************
*** 1131,1135 ****
              /^LOCUS       .+ aa .+/ ],
            medline  = RuleRegexp[ 'Bio::MEDLINE',
!             /^UI  \- [0-9]+$/ ],
            embl     = RuleRegexp[ 'Bio::EMBL',
              /^ID   .+\; .*(DNA|RNA|XXX)\;/ ],
--- 1131,1135 ----
              /^LOCUS       .+ aa .+/ ],
            medline  = RuleRegexp[ 'Bio::MEDLINE',
!             /^PMID\- [0-9]+$/ ],
            embl     = RuleRegexp[ 'Bio::EMBL',
              /^ID   .+\; .*(DNA|RNA|XXX)\;/ ],