[BioRuby-cvs] bioruby/lib/bio/io ncbisoap.rb, 1.1, 1.2 ebisoap.rb, 1.1, 1.2 ddbjxml.rb, 1.12, 1.13

Katayama Toshiaki k at dev.open-bio.org
Wed Mar 28 09:11:05 UTC 2007


Update of /home/repository/bioruby/bioruby/lib/bio/io
In directory dev.open-bio.org:/tmp/cvs-serv5838/lib/bio/io

Modified Files:
	ncbisoap.rb ebisoap.rb ddbjxml.rb 
Log Message:
* assign default wsdl to Bio::DDBJ::XML, Bio::EBI::SOAP, Bio::NCBI::SOAP


Index: ddbjxml.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/io/ddbjxml.rb,v
retrieving revision 1.12
retrieving revision 1.13
diff -C2 -d -r1.12 -r1.13
*** ddbjxml.rb	19 Sep 2006 05:44:41 -0000	1.12
--- ddbjxml.rb	28 Mar 2007 09:11:02 -0000	1.13
***************
*** 28,31 ****
--- 28,34 ----
    BASE_URI = "http://xml.nig.ac.jp/wsdl/"
  
+   # set default to GetEntry
+   SERVER_URI = BASE_URI + "GetEntry.wsdl"
+ 
    def initialize(wsdl = nil)
      super(wsdl || self.class::SERVER_URI)

Index: ncbisoap.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/io/ncbisoap.rb,v
retrieving revision 1.1
retrieving revision 1.2
diff -C2 -d -r1.1 -r1.2
*** ncbisoap.rb	19 Sep 2006 05:41:45 -0000	1.1
--- ncbisoap.rb	28 Mar 2007 09:11:02 -0000	1.2
***************
*** 68,71 ****
--- 68,74 ----
    BASE_URI = "http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/"
  
+   # set default to EUtils
+   SERVER_URI = BASE_URI + "eutils.wsdl"
+ 
    def initialize(wsdl = nil)
      super(wsdl || self.class::SERVER_URI)

Index: ebisoap.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/io/ebisoap.rb,v
retrieving revision 1.1
retrieving revision 1.2
diff -C2 -d -r1.1 -r1.2
*** ebisoap.rb	19 Sep 2006 05:41:45 -0000	1.1
--- ebisoap.rb	28 Mar 2007 09:11:02 -0000	1.2
***************
*** 18,21 ****
--- 18,24 ----
    BASE_URI = "http://www.ebi.ac.uk/Tools/webservices/wsdl/"
  
+   # set default to Dbfetch
+   SERVER_URI = BASE_URI + "WSDbfetch.wsdl"
+ 
    def initialize(wsdl = nil)
      super(wsdl || self.class::SERVER_URI)




More information about the bioruby-cvs mailing list