[BioRuby-cvs] bioruby/lib/bio/util/restriction_enzyme cut_symbol.rb, 1.3, 1.4 double_stranded.rb, 1.2, 1.3

[Trevor Wennblom]

Update of /home/repository/bioruby/bioruby/lib/bio/util/restriction_enzyme
In directory dev.open-bio.org:/tmp/cvs-serv855/lib/bio/util/restriction_enzyme

Modified Files:
	cut_symbol.rb double_stranded.rb 
Log Message:


Index: cut_symbol.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/util/restriction_enzyme/cut_symbol.rb,v
retrieving revision 1.3
retrieving revision 1.4
diff -C2 -d -r1.3 -r1.4
*** cut_symbol.rb	1 Jan 2007 02:16:05 -0000	1.3
--- cut_symbol.rb	1 Jan 2007 05:07:04 -0000	1.4
***************
*** 91,95 ****
  
    #########
!   protected
    #########
    
--- 91,95 ----
  
    #########
!   #protected  # NOTE this is a Module, can't hide CutSymbol__
    #########
    

Index: double_stranded.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/util/restriction_enzyme/double_stranded.rb,v
retrieving revision 1.2
retrieving revision 1.3
diff -C2 -d -r1.2 -r1.3
*** double_stranded.rb	31 Dec 2006 21:50:31 -0000	1.2
--- double_stranded.rb	1 Jan 2007 05:07:04 -0000	1.3
***************
*** 31,41 ****
  # License::   Distributes under the same terms as Ruby
  #
! # A pair of +SingleStrand+ and +SingleStrandComplement+ objects with methods to
  # add utility to their relation.
  # 
  # = Notes
! #  * This is created by Bio::RestrictionEnzyme.new for convenience.
! #  * The two strands accessible are +primary+ and +complement+.
! #  * SingleStrand methods may be used on DoubleStranded and they will be passed to +primary+.
  # 
  class DoubleStranded
--- 31,41 ----
  # License::   Distributes under the same terms as Ruby
  #
! # A pair of SingleStrand and SingleStrandComplement objects with methods to
  # add utility to their relation.
  # 
  # = Notes
! # * This is created by Bio::RestrictionEnzyme.new for convenience.
! # * The two strands accessible are +primary+ and +complement+.
! # * SingleStrand methods may be used on DoubleStranded and they will be passed to +primary+.
  # 
  class DoubleStranded