[BioRuby-cvs] bioruby ChangeLog,1.75,1.76

Naohisa Goto ngoto at dev.open-bio.org
Thu Dec 27 17:28:59 UTC 2007


Update of /home/repository/bioruby/bioruby
In directory dev.open-bio.org:/tmp/cvs-serv27557

Modified Files:
	ChangeLog 
Log Message:
Fixed parse error for NCBI BLAST 2.2.17.
Added Default::Report#references and Default::Report::HSP#stat_method methods.


Index: ChangeLog
===================================================================
RCS file: /home/repository/bioruby/bioruby/ChangeLog,v
retrieving revision 1.75
retrieving revision 1.76
diff -C2 -d -r1.75 -r1.76
*** ChangeLog	26 Dec 2007 14:16:25 -0000	1.75
--- ChangeLog	27 Dec 2007 17:28:57 -0000	1.76
***************
*** 1,2 ****
--- 1,17 ----
+ 2007-12-28  Naohisa Goto <ng at bioruby.org>
+ 
+ 	* lib/bio/appl/blast/report/format0.rb
+ 
+ 	Fixed parse error when compisition-based statistics were enabled.
+ 	In addition, Bio::Blast::Default::Report#references and
+ 	Bio::Blast::Default::Report::HSP#stat_method methods are added.
+ 	In NCBI BLAST 2.2.17, default option of composition-based
+ 	statistics for blastp or tblastn are changed to be enabled
+ 	by default.
+ 
+ 	* lib/bio/appl/blast/report/wublast.rb
+ 
+ 	Changed to follow the above changes in format0.rb.
+ 
  2007-12-26  Naohisa Goto <ng at bioruby.org>
  




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