[BioRuby-cvs] bioruby/lib/bio alignment.rb, 1.21, 1.22 command.rb, 1.16, 1.17 db.rb, 0.36, 0.37 feature.rb, 1.12, 1.13 location.rb, 0.27, 0.28 pathway.rb, 1.35, 1.36 reference.rb, 1.23, 1.24 sequence.rb, 0.57, 0.58 tree.rb, 1.7, 1.8

[Trevor Wennblom]

Update of /home/repository/bioruby/bioruby/lib/bio
In directory dev.open-bio.org:/tmp/cvs-serv20013/lib/bio

Modified Files:
	alignment.rb command.rb db.rb feature.rb location.rb 
	pathway.rb reference.rb sequence.rb tree.rb 
Log Message:
Standardize on The Ruby License

Index: location.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/location.rb,v
retrieving revision 0.27
retrieving revision 0.28
diff -C2 -d -r0.27 -r0.28
*** location.rb	24 Dec 2006 10:10:08 -0000	0.27
--- location.rb	5 Apr 2007 23:35:39 -0000	0.28
***************
*** 4,8 ****
  # Copyright::	Copyright (C) 2001, 2005 Toshiaki Katayama <k at bioruby.org>
  # Copyright::   Copyright (C) 2006 Jan Aerts <jan.aerts at bbsrc.ac.uk>
! # License::	Ruby's
  #
  # $Id$
--- 4,8 ----
  # Copyright::	Copyright (C) 2001, 2005 Toshiaki Katayama <k at bioruby.org>
  # Copyright::   Copyright (C) 2006 Jan Aerts <jan.aerts at bbsrc.ac.uk>
! # License::	The Ruby License
  #
  # $Id$

Index: command.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/command.rb,v
retrieving revision 1.16
retrieving revision 1.17
diff -C2 -d -r1.16 -r1.17
*** command.rb	29 Mar 2007 12:14:46 -0000	1.16
--- command.rb	5 Apr 2007 23:35:39 -0000	1.17
***************
*** 5,9 ****
  # 		Naohisa Goto <ng at bioruby.org>,
  #		Toshiaki Katayama <k at bioruby.org>
! # License::	Ruby's
  #
  #  $Id$
--- 5,9 ----
  # 		Naohisa Goto <ng at bioruby.org>,
  #		Toshiaki Katayama <k at bioruby.org>
! # License::	The Ruby License
  #
  #  $Id$

Index: feature.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/feature.rb,v
retrieving revision 1.12
retrieving revision 1.13
diff -C2 -d -r1.12 -r1.13
*** feature.rb	9 May 2006 11:52:30 -0000	1.12
--- feature.rb	5 Apr 2007 23:35:39 -0000	1.13
***************
*** 4,8 ****
  # Copyright::	Copyright (c) 2002, 2005  Toshiaki Katayama <k at bioruby.org>
  #                             2006        Jan Aerts <jan.aerts at bbsrc.ac.uk>
! # License::	Ruby's
  #
  # $Id$
--- 4,8 ----
  # Copyright::	Copyright (c) 2002, 2005  Toshiaki Katayama <k at bioruby.org>
  #                             2006        Jan Aerts <jan.aerts at bbsrc.ac.uk>
! # License::	The Ruby License
  #
  # $Id$

Index: tree.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/tree.rb,v
retrieving revision 1.7
retrieving revision 1.8
diff -C2 -d -r1.7 -r1.8
*** tree.rb	12 Jan 2007 16:10:28 -0000	1.7
--- tree.rb	5 Apr 2007 23:35:39 -0000	1.8
***************
*** 4,8 ****
  # Copyright::   Copyright (C) 2006
  #               Naohisa Goto <ng at bioruby.org>
! # License::     Ruby's
  #
  # $Id$
--- 4,8 ----
  # Copyright::   Copyright (C) 2006
  #               Naohisa Goto <ng at bioruby.org>
! # License::     The Ruby License
  #
  # $Id$

Index: alignment.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/alignment.rb,v
retrieving revision 1.21
retrieving revision 1.22
diff -C2 -d -r1.21 -r1.22
*** alignment.rb	14 Dec 2006 19:52:53 -0000	1.21
--- alignment.rb	5 Apr 2007 23:35:39 -0000	1.22
***************
*** 5,9 ****
  #             GOTO Naohisa <ng at bioruby.org>
  #
! # License:: Ruby's
  #
  #  $Id$
--- 5,9 ----
  #             GOTO Naohisa <ng at bioruby.org>
  #
! # License:: The Ruby License
  #
  #  $Id$

Index: sequence.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/sequence.rb,v
retrieving revision 0.57
retrieving revision 0.58
diff -C2 -d -r0.57 -r0.58
*** sequence.rb	26 Mar 2006 02:27:59 -0000	0.57
--- sequence.rb	5 Apr 2007 23:35:39 -0000	0.58
***************
*** 8,12 ****
  #               Ryan Raaum <ryan at raaum.org>,
  #               Jan Aerts <jan.aerts at bbsrc.ac.uk>
! # License::     Ruby's
  #
  # $Id$
--- 8,12 ----
  #               Ryan Raaum <ryan at raaum.org>,
  #               Jan Aerts <jan.aerts at bbsrc.ac.uk>
! # License::     The Ruby License
  #
  # $Id$

Index: db.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/db.rb,v
retrieving revision 0.36
retrieving revision 0.37
diff -C2 -d -r0.36 -r0.37
*** db.rb	15 Jan 2007 04:33:52 -0000	0.36
--- db.rb	5 Apr 2007 23:35:39 -0000	0.37
***************
*** 4,8 ****
  # Copyright::  Copyright (C) 2001, 2002, 2005
  #              Toshiaki Katayama <k at bioruby.org>
! # License::    Ruby's
  #
  # $Id$
--- 4,8 ----
  # Copyright::  Copyright (C) 2001, 2002, 2005
  #              Toshiaki Katayama <k at bioruby.org>
! # License::    The Ruby License
  #
  # $Id$

Index: pathway.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/pathway.rb,v
retrieving revision 1.35
retrieving revision 1.36
diff -C2 -d -r1.35 -r1.36
*** pathway.rb	25 Jul 2006 18:21:26 -0000	1.35
--- pathway.rb	5 Apr 2007 23:35:39 -0000	1.36
***************
*** 5,9 ****
  #               Toshiaki Katayama <k at bioruby.org>,
  #               Shuichi Kawashima <shuichi at hgc.jp>
! # License::     Ruby's
  #
  #  $Id$
--- 5,9 ----
  #               Toshiaki Katayama <k at bioruby.org>,
  #               Shuichi Kawashima <shuichi at hgc.jp>
! # License::     The Ruby License
  #
  #  $Id$

Index: reference.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/reference.rb,v
retrieving revision 1.23
retrieving revision 1.24
diff -C2 -d -r1.23 -r1.24
*** reference.rb	31 Dec 2006 21:54:49 -0000	1.23
--- reference.rb	5 Apr 2007 23:35:39 -0000	1.24
***************
*** 5,9 ****
  #               Toshiaki Katayama <k at bioruby.org>,
  #               Ryan Raaum <ryan at raaum.org>
! # License::     Ruby's
  #
  # $Id$
--- 5,9 ----
  #               Toshiaki Katayama <k at bioruby.org>,
  #               Ryan Raaum <ryan at raaum.org>
! # License::     The Ruby License
  #
  # $Id$