[BioRuby-cvs] bioruby/lib/bio/io fetch.rb,1.6,1.7

Jan Aerts aerts at dev.open-bio.org
Mon Mar 27 18:34:37 UTC 2006


Update of /home/repository/bioruby/bioruby/lib/bio/io
In directory dev.open-bio.org:/tmp/cvs-serv20061/io

Modified Files:
	fetch.rb 
Log Message:
Updated docs.


Index: fetch.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/io/fetch.rb,v
retrieving revision 1.6
retrieving revision 1.7
diff -C2 -d -r1.6 -r1.7
*** fetch.rb	20 Mar 2006 12:40:13 -0000	1.6
--- fetch.rb	27 Mar 2006 18:34:35 -0000	1.7
***************
*** 31,36 ****
    # = DESCRIPTION
    # The Bio::Fetch class provides an interface to dbfetch servers. Given
!   # a database name and an accession number, these servers return the nucleic
!   # or amino acid sequence for that accession number in that database.
    #
    # Possible dbfetch servers include:
--- 31,37 ----
    # = DESCRIPTION
    # The Bio::Fetch class provides an interface to dbfetch servers. Given
!   # a database name and an accession number, these servers return the associated
!   # record. For example, for the embl database on the EBI, that would be a
!   # nucleic or amino acid sequence.
    #
    # Possible dbfetch servers include:
***************
*** 82,86 ****
    
      # Get raw database entry by id. This method lets the Bio::Registry class
!     # use Bio::Fetch objects and should probably not be used directly.
      def get_by_id(id)
        fetch(@database, id)
--- 83,87 ----
    
      # Get raw database entry by id. This method lets the Bio::Registry class
!     # use Bio::Fetch objects.
      def get_by_id(id)
        fetch(@database, id)




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