[BioRuby-cvs] bioruby/lib/bio/appl pts1.rb,1.2,1.3
Mitsuteru C. Nakao
nakao at dev.open-bio.org
Mon Jun 5 02:55:53 UTC 2006
Update of /home/repository/bioruby/bioruby/lib/bio/appl
In directory dev.open-bio.org:/tmp/cvs-serv22296/lib/bio/appl
Modified Files:
pts1.rb
Log Message:
* added Bio::PTS1::Report#entry_id.
Index: pts1.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/appl/pts1.rb,v
retrieving revision 1.2
retrieving revision 1.3
diff -C2 -d -r1.2 -r1.3
*** pts1.rb 9 May 2006 08:18:49 -0000 1.2
--- pts1.rb 5 Jun 2006 02:55:51 -0000 1.3
***************
*** 175,178 ****
--- 175,181 ----
class Report
+ # Query sequence name.
+ attr_reader :entry_id
+
# Amino acids subsequence at C-terminal region.
attr_reader :cterm
***************
*** 229,232 ****
--- 232,237 ----
@output.each do |line|
case line
+ when /Name<\/td><td>(\S.+)<\/td><\/tr>/
+ @entry_id = $1
when /C-terminus<\/td><td>(\w+)<\/td>/
@cterm = $1
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