[BioRuby-cvs] bioruby/lib/bio/shell/plugin emboss.rb,NONE,1.1

[Katayama Toshiaki]

Update of /home/repository/bioruby/bioruby/lib/bio/shell/plugin
In directory pub.open-bio.org:/tmp/cvs-serv5002/lib/bio/shell/plugin

Added Files:
	emboss.rb 
Log Message:
* entret/seqret commands in EMBOSS are supported
  * Bio::EMBOSS.seqret(usa), Bio::EMBOSS.entret(usa)
  * bioruby> seqret(usa), entret(usa)



--- NEW FILE: emboss.rb ---
#
# = bio/shell/plugin/emboss.rb - methods to use EMBOSS
#
# Copyright::	Copyright (C) 2005
#		Toshiaki Katayama <k at bioruby.org>
# License::	LGPL
#
# $Id: emboss.rb,v 1.1 2006/01/28 07:22:14 k Exp $
#
#--
#
#  This library is free software; you can redistribute it and/or
#  modify it under the terms of the GNU Lesser General Public
#  License as published by the Free Software Foundation; either
#  version 2 of the License, or (at your option) any later version.
#
#  This library is distributed in the hope that it will be useful,
#  but WITHOUT ANY WARRANTY; without even the implied warranty of
#  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
#  Lesser General Public License for more details.
#
#  You should have received a copy of the GNU Lesser General Public
#  License along with this library; if not, write to the Free Software
#  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307  USA
#
#++
#

module Bio::Shell

  private

  def seqret(usa)
    Bio::EMBOSS.seqret(usa)
  end

  def entret(usa)
    Bio::EMBOSS.entret(usa)
  end

end