[BioRuby-cvs] bioruby/lib/bio/appl/hmmer report.rb,1.9,1.10

Mitsuteru C. Nakao nakao at pub.open-bio.org
Thu Feb 2 17:08:39 UTC 2006


Update of /home/repository/bioruby/bioruby/lib/bio/appl/hmmer
In directory pub.open-bio.org:/tmp/cvs-serv1837/lib/bio/appl/hmmer

Modified Files:
	report.rb 
Log Message:
* Updated RDoc.


Index: report.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/appl/hmmer/report.rb,v
retrieving revision 1.9
retrieving revision 1.10
diff -C2 -d -r1.9 -r1.10
*** report.rb	31 Oct 2005 09:12:03 -0000	1.9
--- report.rb	2 Feb 2006 17:08:36 -0000	1.10
***************
*** 1,7 ****
  #
! # bio/appl/hmmer/report.rb - hmmsearch, hmmpfam parserer
  #
! #   Copyright (C) 2002 Hiroshi Suga <suga at biophys.kyoto-u.ac.jp>
! #   Copyright (C) 2005 Masashi Fujita <fujita at kuicr.kyoto-u.ac.jp>
  #
  #  This library is free software; you can redistribute it and/or
--- 1,43 ----
  #
! # = bio/appl/hmmer/report.rb - hmmsearch, hmmpfam parserer
[...999 lines suppressed...]
! --- Bio::HMMER::Report::Hsp#query_from
! --- Bio::HMMER::Report::Hsp#query_to
! --- Bio::HMMER::Report::Hsp#target_seq
! --- Bio::HMMER::Report::Hsp#target_from
! --- Bio::HMMER::Report::Hsp#target_to
! 
! --- Bio::HMMER::Report::Hsp#csline
! --- Bio::HMMER::Report::Hsp#rfline
  
- =end
  
--- 694,701 ----
        print "query_to : ".rjust(indent)
        p hsp.query_to		# hmm_t, seq_t
!     end 
    end
  
! end 
  
  




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