[BioRuby-cvs] bioruby/lib/bio/io flatfile.rb,1.38,1.39
Naohisa Goto
ngoto at pub.open-bio.org
Mon Oct 31 22:15:36 EST 2005
Update of /home/repository/bioruby/bioruby/lib/bio/io
In directory pub.open-bio.org:/tmp/cvs-serv6163
Modified Files:
flatfile.rb
Log Message:
Fixed typo and possibly unsuitable descriptions.
Index: flatfile.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/io/flatfile.rb,v
retrieving revision 1.38
retrieving revision 1.39
diff -C2 -d -r1.38 -r1.39
*** flatfile.rb 1 Nov 2005 02:56:11 -0000 1.38
--- flatfile.rb 1 Nov 2005 03:15:33 -0000 1.39
***************
*** 42,46 ****
# which contains +dbclass+ data.
#
! # +dbclass+ shoud be a class (or module) or nil.
# e.g. Bio::GenBank, Bio::FastaFormat.
#
--- 42,46 ----
# which contains +dbclass+ data.
#
! # +dbclass+ should be a class (or module) or nil.
# e.g. Bio::GenBank, Bio::FastaFormat.
#
***************
*** 223,226 ****
--- 223,227 ----
end
+ # (Not recommended to use it.)
# Sets position of input stream.
# If the input stream is not a normal file,
***************
*** 248,252 ****
# Similar to IO#gets.
! # Internal use only. Users shold not call it directly.
def gets(io_rs = $/)
if @prefetch.size > 0
--- 249,253 ----
# Similar to IO#gets.
! # Internal use only. Users should not call it directly.
def gets(io_rs = $/)
if @prefetch.size > 0
***************
*** 304,308 ****
# Similar to IO#ungetc.
! # Internal use only. Users should not call it directly.
def ungetc(c)
@prefetch = sprintf("%c", c) + @prefetch
--- 305,309 ----
# Similar to IO#ungetc.
! # Internal use only. Users should not call it.
def ungetc(c)
@prefetch = sprintf("%c", c) + @prefetch
***************
*** 338,343 ****
# If fails, returns nil or false. Otherwise, returns database class.
#
! # The method can be called anytime if you want (but not so recommended).
! # It may be useful if input file is a mixture of muitiple format data.
def autodetect(lines = 31)
r = nil
--- 339,344 ----
# If fails, returns nil or false. Otherwise, returns database class.
#
! # The method can be called anytime if you want (but not recommended).
! # This might be useful if input file is a mixture of muitiple format data.
def autodetect(lines = 31)
r = nil
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