[BioRuby-cvs] bioruby/test/data/genscan sample.report,NONE,1.1

[Mitsuteru C. Nakao]

Update of /home/repository/bioruby/bioruby/test/data/genscan
In directory pub.open-bio.org:/tmp/cvs-serv29466/test/data/genscan

Added Files:
	sample.report 
Log Message:
* Newly added.


--- NEW FILE: sample.report ---
GENSCAN 1.0	Date run: 30-May-103	Time: 14:06:28

Sequence HUMRASH : 12942 bp : 68.17% C+G : Isochore 4 (57 - 100 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1664   1774  111  1  0   94   83   212 0.997  21.33
 1.02 Intr +   2042   2220  179  1  2  104   66   408 0.997  40.12
 1.03 Intr +   2374   2533  160  1  1   89   94   302 0.999  32.08
 1.04 Term +   3231   3350  120  2  0  115   48   202 0.980  18.31
 1.05 PlyA +   3722   3727    6                              -5.80

 2.00 Prom +   6469   6508   40                              -7.92
 2.01 Init +   8153   8263  111  1  0   94   83   212 0.998  21.33
 2.02 Intr +   8531   8709  179  1  2  104   66   408 0.997  40.12
 2.03 Intr +   8863   9022  160  1  1   89   94   302 0.999  32.08
 2.04 Term +   9720   9839  120  2  0  115   48   202 0.961  18.31

Predicted peptide sequence(s):

Predicted coding sequence(s):


>HUMRASH|GENSCAN_predicted_peptide_1|189_aa
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG
QEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL
AARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPG
CMSCKCVLS

>HUMRASH|GENSCAN_predicted_CDS_1|570_bp
atgacggaatataagctggtggtggtgggcgccggcggtgtgggcaagagtgcgctgacc
atccagctgatccagaaccattttgtggacgaatacgaccccactatagaggattcctac
cggaagcaggtggtcattgatggggagacgtgcctgttggacatcctggataccgccggc
caggaggagtacagcgccatgcgggaccagtacatgcgcaccggggagggcttcctgtgt
gtgtttgccatcaacaacaccaagtcttttgaggacatccaccagtacagggagcagatc
aaacgggtgaaggactcggatgacgtgcccatggtgctggtggggaacaagtgtgacctg
gctgcacgcactgtggaatctcggcaggctcaggacctcgcccgaagctacggcatcccc
tacatcgagacctcggccaagacccggcagggagtggaggatgccttctacacgttggtg
cgtgagatccggcagcacaagctgcggaagctgaaccctcctgatgagagtggccccggc
tgcatgagctgcaagtgtgtgctctcctga

>HUMRASH|GENSCAN_predicted_peptide_2|189_aa
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG
QEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL
AARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPG
CMSCKCVLS

>HUMRASH|GENSCAN_predicted_CDS_2|570_bp
atgacggaatataagctggtggtggtgggcgccggcggtgtgggcaagagtgcgctgacc
atccagctgatccagaaccattttgtggacgaatacgaccccactatagaggattcctac
cggaagcaggtggtcattgatggggagacgtgcctgttggacatcctggataccgccggc
caggaggagtacagcgccatgcgggaccagtacatgcgcaccggggagggcttcctgtgt
gtgtttgccatcaacaacaccaagtcttttgaggacatccaccagtacagggagcagatc
aaacgggtgaaggactcggatgacgtgcccatggtgctggtggggaacaagtgtgacctg
gctgcacgcactgtggaatctcggcaggctcaggacctcgcccgaagctacggcatcccc
tacatcgagacctcggccaagacccggcagggagtggaggatgccttctacacgttggtg
cgtgagatccggcagcacaagctgcggaagctgaaccctcctgatgagagtggccccggc
tgcatgagctgcaagtgtgtgctctcctga