[BioRuby-cvs] bioruby/lib/bio/appl/blast format0.rb,1.8,1.9

Naohisa Goto ngoto at pub.open-bio.org
Sun Aug 7 13:27:53 EDT 2005


Update of /home/repository/bioruby/bioruby/lib/bio/appl/blast
In directory pub.open-bio.org:/tmp/cvs-serv27826/blast

Modified Files:
	format0.rb 
Log Message:
* lib/bio/appl/bl2seq/report.rb:
  Newly added bl2seq (BLAST 2 sequences) output parser.
* lib/bio/appl/blast/format0.rb:
  Added `self.class::` before F0dbstat.new for bl2seq/report.rb 


Index: format0.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/appl/blast/format0.rb,v
retrieving revision 1.8
retrieving revision 1.9
diff -C2 -d -r1.8 -r1.9
*** format0.rb	20 Jun 2005 11:35:30 -0000	1.8
--- format0.rb	7 Aug 2005 16:42:28 -0000	1.9
***************
*** 187,191 ****
  	    dbs << data.shift
  	  end
! 	  @f0dbstat = F0dbstat.new(dbs)
  	  i = -1
  	  while r = data[0] and /^Lambda/ =~ r
--- 187,191 ----
  	    dbs << data.shift
  	  end
! 	  @f0dbstat = self.class::F0dbstat.new(dbs)
  	  i = -1
  	  while r = data[0] and /^Lambda/ =~ r



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