[Biopython] [help] Write Genbank File

[Peter Cock]

Hello Meijun,

I recommend starting by parsing a known GenBank file, and looking at how
the objects are setup. You will need to copy that.

Have you looked at chapter 4 of the Tutorial?

http://biopython.org/DIST/docs/tutorial/Tutorial.html

Once you have a SeqRecord, the .features attribute is just a list of
SeqFeature objects. The feature annotation is in the .qualifiers
dictionary, the values should generally be lists of strings (match what the
GenBank parser gives you on a known example).

Peter

On Sat, Feb 29, 2020 at 10:06 PM Meijun WU <meijun.wu at etu.uca.fr> wrote:

> Hello,
>
>
>
> I have been struggle a while to write a genbank file with biopython, i
> have sucedded, but i can’t find any information about adding the feature
> sequence into the feature section.
>
> I have tried to read the source code but it’s quite a lot and it have too
> many information …
>
> Sorry to trouble and thanks in advance.
>
>
>
> Cordialement,
>
> Meijun Wu
>
>
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